| SRR4457252 | 2nd_leaf | DAH12 | 0.29 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.62 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.81 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.07 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.74 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 0.77 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.10 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.09 | MC |
| SRR5560728 | caryopsis | wild_type | 0.42 | MC |
| SRR5560729 | caryopsis | wild_type | 0.63 | MC |
| SRR7265400 | coleoptile | 2dA | 0.60 | MC |
| SRR7265401 | coleoptile | 2dA | 0.60 | MC |
| SRR7265402 | coleoptile | 2dA | 0.68 | MC |
| SRR7265403 | coleoptile | 2dN | 0.43 | MC |
| SRR7265404 | coleoptile | 2dN | 0.63 | MC |
| SRR7265405 | coleoptile | 2dN | 0.73 | MC |
| SRR7265407 | coleoptile | 3dA | 0.51 | MC |
| SRR7265409 | coleoptile | 3dN | 1.27 | MC |
| SRR7265410 | coleoptile | 3dN | 1.09 | MC |
| SRR7265411 | coleoptile | 3dN | 0.56 | MC |
| SRR7265412 | coleoptile | 4dA | 0.96 | MC |
| SRR7265415 | coleoptile | 4dN | 1.16 | MC |
| SRR7265417 | coleoptile | 4dN | 0.57 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.82 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.55 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.51 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.03 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.98 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.41 | MC |
| SRR7265376 | embryo | 1hA | 1.70 | MC |
| SRR7265377 | embryo | 1hA | 0.82 | MC |
| SRR7265378 | embryo | 1hA | 0.86 | MC |
| SRR7265379 | embryo | 1hN | 1.06 | MC |
| SRR7265380 | embryo | 1hN | 1.31 | MC |
| SRR7265381 | embryo | 1hN | 0.53 | MC |
| SRR7265382 | embryo | 3hA | 1.62 | MC |
| SRR7265383 | embryo | 3hA | 2.04 | MC |
| SRR7265384 | embryo | 3hA | 1.44 | MC |
| SRR7265386 | embryo | 3hN | 0.43 | MC |
| SRR7265387 | embryo | 3hN | 1.05 | MC |
| SRR7265388 | embryo | 12hA | 1.67 | MC |
| SRR7265389 | embryo | 12hA | 0.93 | MC |
| SRR7265390 | embryo | 12hA | 1.18 | MC |
| SRR7265391 | embryo | 12hN | 1.49 | MC |
| SRR7265392 | embryo | 12hN | 1.22 | MC |
| SRR7265393 | embryo | 12hN | 0.61 | MC |
| SRR7265395 | embryo | 24hA | 0.96 | MC |
| SRR7265396 | embryo | 24hA | 0.55 | MC |
| SRR7265397 | embryo | 24hN | 1.08 | MC |
| SRR7265398 | embryo | 24hN | 0.65 | MC |
| SRR7265399 | embryo | 24hN | 0.74 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.28 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.21 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.58 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.43 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.00 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.19 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.78 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.33 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.82 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.47 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.65 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.51 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.12 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.68 | MC |
| SRR1213691 | flower | wt | 0.31 | MC |
| SRR8060836 | leaf | wild_type | 0.39 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.15 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.56 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.23 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.56 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.74 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.57 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.68 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.48 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.78 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.46 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.51 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.75 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.56 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.71 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.35 | MC |
| SRR6417967 | leaf | H2O_control | 0.70 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.80 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.47 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.53 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.67 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.67 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.03 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.29 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.24 | MC |
| SRR1213693 | leaf | wt | 0.41 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.03 | MC |
| SRR6502090 | leaf | control | 0.41 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.54 | MC |
| SRR5856928 | leaf | control | 0.19 | MC |
| SRR5856935 | leaf | control | 0.20 | MC |
| SRR5856937 | leaf | salt | 0.16 | MC |
| SRR5856938 | leaf | salt | 0.18 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.29 | MC |
| SRR5110429 | panicle | Dawn | 0.60 | MC |
| SRR5110432 | panicle | Dawn | 0.43 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.78 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.52 | MC |
| SRR5110445 | panicle | Dusk | 0.70 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.36 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.46 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.64 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.27 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.43 | MC |
| SRR1633182 | panicle | WT | 0.37 | MC |
| SRR1633185 | panicle | WT | 0.86 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.61 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.49 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.45 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.51 | MC |
| SRR5126165 | root | "mock,14_days" | 0.40 | MC |
| SRR5126169 | root | "mock,14_days" | 0.43 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.47 | MC |
| SRR1213695 | root | wt | 0.43 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.45 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.37 | MC |
| SRR2154082 | seedling | wt | 0.47 | MC |
| SRR2154083 | seedling | wt | 0.40 | MC |
| SRR2154084 | seedling | wt | 0.37 | MC |
| SRR2154087 | seedling | wt | 0.50 | MC |
| SRR3098742 | seedling | wt | 0.26 | MC |
| SRR358791 | seedling | wt | 0.60 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.51 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.30 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.10 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.69 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.95 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.62 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.33 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.40 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.38 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.49 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.55 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.49 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.53 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.07 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.54 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.81 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.07 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 1.52 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.69 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.74 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.70 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.63 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.78 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 0.99 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.35 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.87 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.98 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.64 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 0.41 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.57 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.60 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.49 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.22 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.14 | MC |