| SRR358796 | callus | wt | 2.19 | MC |
| SRR5560728 | caryopsis | wild_type | 0.56 | MC |
| SRR5560729 | caryopsis | wild_type | 0.70 | MC |
| SRR7265400 | coleoptile | 2dA | 0.73 | MC |
| SRR7265401 | coleoptile | 2dA | 0.30 | MC |
| SRR7265402 | coleoptile | 2dA | 0.42 | MC |
| SRR7265403 | coleoptile | 2dN | 0.76 | MC |
| SRR7265404 | coleoptile | 2dN | 0.74 | MC |
| SRR7265405 | coleoptile | 2dN | 0.35 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.60 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.07 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.52 | MC |
| SRR7265376 | embryo | 1hA | 0.58 | MC |
| SRR7265377 | embryo | 1hA | 0.54 | MC |
| SRR7265378 | embryo | 1hA | 0.27 | MC |
| SRR7265380 | embryo | 1hN | 0.41 | MC |
| SRR7265381 | embryo | 1hN | 0.43 | MC |
| SRR7265384 | embryo | 3hA | 0.33 | MC |
| SRR7265385 | embryo | 3hN | 0.42 | MC |
| SRR7265386 | embryo | 3hN | 0.43 | MC |
| SRR7265388 | embryo | 12hA | 0.79 | MC |
| SRR7265389 | embryo | 12hA | 1.12 | MC |
| SRR7265390 | embryo | 12hA | 0.65 | MC |
| SRR7265391 | embryo | 12hN | 0.48 | MC |
| SRR7265394 | embryo | 24hA | 0.93 | MC |
| SRR7265395 | embryo | 24hA | 0.63 | MC |
| SRR7265396 | embryo | 24hA | 1.00 | MC |
| SRR7265397 | embryo | 24hN | 0.60 | MC |
| SRR7265398 | embryo | 24hN | 0.46 | MC |
| SRR7265399 | embryo | 24hN | 0.76 | MC |
| SRR1213691 | flower | wt | 0.44 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.74 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.23 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.46 | MC |
| SRR6417969 | leaf | H2O_control | 0.37 | MC |
| SRR1213692 | leaf | wt | 0.42 | MC |
| SRR1213693 | leaf | wt | 0.31 | MC |
| SRR5856933 | leaf | control | 0.50 | MC |
| SRR5856934 | leaf | control | 0.63 | MC |
| SRR5856935 | leaf | control | 0.33 | MC |
| SRR5856937 | leaf | salt | 0.20 | MC |
| SRR5856938 | leaf | salt | 0.20 | MC |
| SRR5110447 | panicle | Dusk | 0.41 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.84 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.34 | MC |
| SRR1633182 | panicle | WT | 0.45 | MC |
| SRR1633185 | panicle | WT | 0.30 | MC |
| SRR5126147 | root | "mock,1_day" | 0.34 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.53 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.09 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.11 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 0.75 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.36 | MC |
| SRR1213695 | root | wt | 0.24 | MC |
| SRR4947479 | root | control | 0.62 | MC |
| SRR4947482 | root | Al | 0.46 | MC |
| SRR4947484 | root | Al | 0.64 | MC |
| SRR4947501 | root | Al | 0.61 | MC |
| SRR4947506 | root | Al | 0.54 | MC |
| SRR4947507 | root | Al | 1.14 | MC |
| SRR6502096 | root | control | 0.35 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.87 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.51 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.26 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.53 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.32 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.38 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.09 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.06 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.95 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.84 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.55 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.63 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.19 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.13 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.53 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.32 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.30 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.48 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.32 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.52 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.55 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.61 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.20 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.85 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.81 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.59 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.62 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.21 | MC |