| SRR4457251 | 2nd_leaf | DAH4 | 2.63 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.43 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.83 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.40 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.42 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.29 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.96 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.69 | MC |
| SRR358795 | callus | wt | 4.50 | MC |
| SRR358796 | callus | wt | 3.30 | MC |
| SRR358797 | callus | wt | 3.86 | MC |
| SRR6320498 | carpel | wt | 5.62 | MC |
| SRR4947495 | root | control | 1.92 | MC |
| SRR7265401 | coleoptile | 2dA | 1.46 | MC |
| SRR7265402 | coleoptile | 2dA | 2.81 | MC |
| SRR7265406 | coleoptile | 3dA | 3.62 | MC |
| SRR7265413 | coleoptile | 4dA | 4.78 | MC |
| SRR7265415 | coleoptile | 4dN | 1.47 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.12 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.55 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.59 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.25 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.60 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.27 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.35 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.63 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.90 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.72 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.19 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.27 | MC |
| SRR7265378 | embryo | 1hA | 0.45 | MC |
| SRR7265379 | embryo | 1hN | 0.90 | MC |
| SRR7265380 | embryo | 1hN | 0.61 | MC |
| SRR7265381 | embryo | 1hN | 0.69 | MC |
| SRR7265382 | embryo | 3hA | 0.79 | MC |
| SRR7265384 | embryo | 3hA | 0.49 | MC |
| SRR7265387 | embryo | 3hN | 0.25 | MC |
| SRR7265394 | embryo | 24hA | 1.09 | MC |
| SRR7265396 | embryo | 24hA | 0.51 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.29 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.32 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.43 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.63 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.29 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.67 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.05 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.35 | MC |
| SRR8060835 | leaf | wild_type | 0.73 | MC |
| SRR8060836 | leaf | wild_type | 3.16 | MC |
| SRR8060837 | leaf | wild_type | 2.22 | MC |
| SRR8240824 | leaf | wild_type | 2.17 | MC |
| SRR8240825 | leaf | wild_type | 0.34 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.04 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.47 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.41 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.50 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.15 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.88 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.09 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.61 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.60 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.57 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.85 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.10 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.77 | MC |
| SRR504365 | leaf | wt | 3.34 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.66 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.27 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.78 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.15 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.85 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.54 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.64 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.27 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.65 | MC |
| SRR1213692 | leaf | wt | 0.65 | MC |
| SRR1213693 | leaf | wt | 0.35 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.57 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.45 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.78 | MC |
| SRR6502088 | leaf | control | 1.76 | MC |
| SRR6502089 | leaf | control | 1.87 | MC |
| SRR6502090 | leaf | control | 0.50 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.85 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.72 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.04 | MC |
| SRR6502100 | leaf | control | 1.01 | MC |
| SRR6502101 | leaf | control | 0.78 | MC |
| SRR6502102 | leaf | control | 2.43 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.32 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.03 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 4.76 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 4.74 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 5.81 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.56 | MC |
| SRR6168980 | leaf | none (control) | 1.57 | MC |
| SRR8582888 | panicle | AM | 2.06 | MC |
| SRR8582889 | panicle | AM | 1.14 | MC |
| SRR8582890 | panicle | AM | 0.66 | MC |
| SRR8582891 | panicle | PM | 4.06 | MC |
| SRR8582892 | panicle | PM | 2.40 | MC |
| SRR8582893 | panicle | PM | 1.76 | MC |
| SRR5110432 | panicle | Dawn | 3.01 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.89 | MC |
| SRR5110446 | panicle | Dusk | 3.80 | MC |
| SRR5110448 | panicle | Dusk | 4.08 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.37 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.69 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.78 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 4.14 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.60 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.77 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.68 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.51 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.17 | MC |
| SRR1213694 | root | wt | 1.37 | MC |
| SRR4947478 | root | control | 3.41 | MC |
| SRR4947479 | root | control | 3.68 | MC |
| SRR4947482 | root | Al | 3.00 | MC |
| SRR4947490 | root | Al | 4.41 | MC |
| SRR4947491 | root | Al | 2.01 | MC |
| SRR4947494 | root | control | 3.98 | MC |
| SRR4947498 | root | Al | 2.52 | MC |
| SRR4947499 | root | Al | 1.63 | MC |
| SRR4947500 | root | Al | 3.75 | MC |
| SRR4947501 | root | Al | 4.10 | MC |
| SRR4947502 | root | control | 2.25 | MC |
| SRR4947507 | root | Al | 0.89 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.57 | MC |
| SRR1944583 | seedling | no_treatment | 3.70 | MC |
| SRR358793 | seedling | wt | 1.17 | MC |
| SRR358794 | seedling | wt | 1.25 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.92 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.28 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.45 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.72 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.31 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.65 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 3.21 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.04 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.33 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.04 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.73 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.31 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.80 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.65 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.55 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.12 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.33 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.66 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.62 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.70 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.14 | MC |