| SRR6320498 | carpel | wt | 4.01 | MC |
| SRR5560727 | caryopsis | wild_type | 0.46 | MC |
| SRR5560728 | caryopsis | wild_type | 0.60 | MC |
| SRR5560729 | caryopsis | wild_type | 0.68 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.02 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.15 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.65 | MC |
| SRR7265400 | coleoptile | 2dA | 2.11 | MC |
| SRR7265401 | coleoptile | 2dA | 2.04 | MC |
| SRR7265402 | coleoptile | 2dA | 1.88 | MC |
| SRR7265403 | coleoptile | 2dN | 1.83 | MC |
| SRR7265404 | coleoptile | 2dN | 0.96 | MC |
| SRR7265405 | coleoptile | 2dN | 1.38 | MC |
| SRR7265406 | coleoptile | 3dA | 3.26 | MC |
| SRR7265407 | coleoptile | 3dA | 2.21 | MC |
| SRR7265408 | coleoptile | 3dA | 1.10 | MC |
| SRR7265409 | coleoptile | 3dN | 1.16 | MC |
| SRR7265410 | coleoptile | 3dN | 0.54 | MC |
| SRR7265411 | coleoptile | 3dN | 1.00 | MC |
| SRR7265412 | coleoptile | 4dA | 0.81 | MC |
| SRR7265413 | coleoptile | 4dA | 3.24 | MC |
| SRR7265414 | coleoptile | 4dA | 2.02 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.19 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.14 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.43 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.40 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.46 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.37 | MC |
| SRR7265388 | embryo | 12hA | 2.78 | MC |
| SRR7265389 | embryo | 12hA | 2.39 | MC |
| SRR7265390 | embryo | 12hA | 1.98 | MC |
| SRR7265391 | embryo | 12hN | 1.77 | MC |
| SRR7265392 | embryo | 12hN | 1.94 | MC |
| SRR7265393 | embryo | 12hN | 0.93 | MC |
| SRR7265394 | embryo | 24hA | 1.06 | MC |
| SRR7265395 | embryo | 24hA | 2.92 | MC |
| SRR7265396 | embryo | 24hA | 2.72 | MC |
| SRR7265397 | embryo | 24hN | 1.63 | MC |
| SRR7265398 | embryo | 24hN | 0.99 | MC |
| SRR7265399 | embryo | 24hN | 2.55 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.38 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.30 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.10 | MC |
| SRR1213691 | flower | wt | 1.78 | MC |
| SRR8240824 | leaf | wild_type | 0.89 | MC |
| SRR8240825 | leaf | wild_type | 0.42 | MC |
| SRR8240826 | leaf | wild_type | 0.28 | MC |
| SRR8240818 | leaf | wild_type | 0.74 | MC |
| SRR8240819 | leaf | wild_type | 0.93 | MC |
| SRR8240820 | leaf | wild_type | 0.67 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.18 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.96 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.55 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.34 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.26 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.61 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.58 | MC |
| SRR1761529 | leaf | drought | 1.54 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.54 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.17 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.51 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.35 | MC |
| SRR1213692 | leaf | wt | 0.89 | MC |
| SRR5856932 | leaf | salt | 0.20 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.87 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.89 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 1.61 | MC |
| SRR6168973 | leaf | none (control) | 0.43 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.62 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.15 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.30 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.53 | MC |
| SRR5110429 | panicle | Dawn | 1.37 | MC |
| SRR5110431 | panicle | Dawn | 0.39 | MC |
| SRR5110432 | panicle | Dawn | 1.21 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.41 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.65 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.42 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.58 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.93 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.73 | MC |
| SRR5110445 | panicle | Dusk | 0.43 | MC |
| SRR5110446 | panicle | Dusk | 1.13 | MC |
| SRR5110447 | panicle | Dusk | 1.13 | MC |
| SRR5110448 | panicle | Dusk | 1.40 | MC |
| SRR5110449 | panicle | Dawn + 14h | 0.88 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.73 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.42 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.88 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.59 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.47 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.00 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.62 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.53 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.75 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.49 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.48 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 4.47 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.84 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.09 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.67 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.54 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.97 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.49 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.12 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.55 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.82 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.62 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.67 | MC |
| SRR6441555 | seedling | wild_type | 0.52 | MC |
| SRR2154082 | seedling | wt | 0.86 | MC |
| SRR2154083 | seedling | wt | 0.81 | MC |
| SRR2154084 | seedling | wt | 0.49 | MC |
| SRR2154087 | seedling | wt | 0.81 | MC |
| SRR3098741 | seedling | wt | 0.33 | MC |
| SRR3098742 | seedling | wt | 0.76 | MC |
| SRR3098743 | seedling | wt | 0.36 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.72 | MC |
| SRR1944583 | seedling | no_treatment | 0.55 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.25 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.53 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.78 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.58 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.31 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.76 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.00 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.64 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.65 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.95 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.88 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.49 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.71 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.27 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.44 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.74 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.32 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.56 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.60 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.63 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.68 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.44 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.62 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.23 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.38 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.40 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.15 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.66 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.95 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.63 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.15 | MC |