| SRR4457249 | 2nd_leaf | DAH4 | 4.12 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.91 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 3.49 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.62 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.79 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.76 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.61 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.44 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.12 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.67 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.18 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.55 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.89 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.18 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.14 | MC |
| SRR6320473 | carpel | wt | 2.27 | MC |
| SRR6320498 | carpel | wt | 1.38 | MC |
| SRR5560727 | caryopsis | wild_type | 3.95 | MC |
| SRR5560728 | caryopsis | wild_type | 1.47 | MC |
| SRR5560729 | caryopsis | wild_type | 1.94 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.42 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.90 | MC |
| SRR4947495 | root | control | 1.21 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.31 | MC |
| SRR7265400 | coleoptile | 2dA | 0.96 | MC |
| SRR7265401 | coleoptile | 2dA | 1.14 | MC |
| SRR7265402 | coleoptile | 2dA | 2.18 | MC |
| SRR7265403 | coleoptile | 2dN | 1.21 | MC |
| SRR7265404 | coleoptile | 2dN | 1.15 | MC |
| SRR7265405 | coleoptile | 2dN | 1.36 | MC |
| SRR7265406 | coleoptile | 3dA | 1.79 | MC |
| SRR7265407 | coleoptile | 3dA | 2.27 | MC |
| SRR7265408 | coleoptile | 3dA | 0.90 | MC |
| SRR7265409 | coleoptile | 3dN | 2.35 | MC |
| SRR7265410 | coleoptile | 3dN | 1.61 | MC |
| SRR7265411 | coleoptile | 3dN | 1.54 | MC |
| SRR7265412 | coleoptile | 4dA | 2.29 | MC |
| SRR7265413 | coleoptile | 4dA | 2.16 | MC |
| SRR7265414 | coleoptile | 4dA | 3.47 | MC |
| SRR7265415 | coleoptile | 4dN | 1.50 | MC |
| SRR7265417 | coleoptile | 4dN | 1.07 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.09 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.31 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.12 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.47 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.36 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.40 | MC |
| SRR7265376 | embryo | 1hA | 3.00 | MC |
| SRR7265377 | embryo | 1hA | 3.15 | MC |
| SRR7265378 | embryo | 1hA | 2.72 | MC |
| SRR7265379 | embryo | 1hN | 3.09 | MC |
| SRR7265380 | embryo | 1hN | 2.93 | MC |
| SRR7265382 | embryo | 3hA | 2.33 | MC |
| SRR7265383 | embryo | 3hA | 2.18 | MC |
| SRR7265384 | embryo | 3hA | 2.73 | MC |
| SRR7265385 | embryo | 3hN | 2.60 | MC |
| SRR7265386 | embryo | 3hN | 2.44 | MC |
| SRR7265387 | embryo | 3hN | 2.74 | MC |
| SRR7265388 | embryo | 12hA | 2.51 | MC |
| SRR7265389 | embryo | 12hA | 2.15 | MC |
| SRR7265390 | embryo | 12hA | 2.19 | MC |
| SRR7265391 | embryo | 12hN | 1.98 | MC |
| SRR7265392 | embryo | 12hN | 1.46 | MC |
| SRR7265393 | embryo | 12hN | 0.52 | MC |
| SRR7265394 | embryo | 24hA | 2.58 | MC |
| SRR7265395 | embryo | 24hA | 2.25 | MC |
| SRR7265396 | embryo | 24hA | 2.49 | MC |
| SRR7265397 | embryo | 24hN | 1.24 | MC |
| SRR7265398 | embryo | 24hN | 0.80 | MC |
| SRR7265399 | embryo | 24hN | 1.67 | MC |
| SRR2338867 | endosprem | control | 1.14 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.40 | MC |
| SRR4457239 | flag_leaf | DAH20 | 4.19 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.25 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.58 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.89 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.35 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.27 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.96 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.13 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.88 | MC |
| SRR1213691 | flower | wt | 0.67 | MC |
| SRR8240824 | leaf | wild_type | 2.08 | MC |
| SRR8240825 | leaf | wild_type | 1.30 | MC |
| SRR8240818 | leaf | wild_type | 1.80 | MC |
| SRR8240819 | leaf | wild_type | 2.30 | MC |
| SRR8240820 | leaf | wild_type | 2.24 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.44 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.73 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.35 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.68 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.24 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.44 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.35 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.40 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.39 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.40 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.36 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.66 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.93 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.46 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.02 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.93 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.46 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.90 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.41 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.56 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.46 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.90 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.41 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.56 | MC |
| SRR1761528 | leaf | drought | 2.46 | MC |
| SRR1761529 | leaf | drought | 1.90 | MC |
| SRR1761530 | leaf | control | 5.41 | MC |
| SRR1761531 | leaf | control | 3.56 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.90 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.31 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.97 | MC |
| SRR6417967 | leaf | H2O_control | 1.82 | MC |
| SRR6417968 | leaf | H2O_control | 0.46 | MC |
| SRR6417969 | leaf | H2O_control | 1.06 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.52 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.74 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.46 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.28 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 3.07 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.43 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.14 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.36 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.08 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.17 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.54 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.14 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.70 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.58 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.15 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.04 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.09 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.47 | MC |
| SRR6502088 | leaf | control | 3.80 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.15 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.46 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.52 | MC |
| SRR6502102 | leaf | control | 2.81 | MC |
| SRR5856927 | leaf | control | 0.53 | MC |
| SRR5856928 | leaf | control | 0.52 | MC |
| SRR5856929 | leaf | control | 0.79 | MC |
| SRR5856930 | leaf | salt | 1.24 | MC |
| SRR5856931 | leaf | salt | 1.12 | MC |
| SRR5856932 | leaf | salt | 1.74 | MC |
| SRR5856933 | leaf | control | 1.52 | MC |
| SRR5856934 | leaf | control | 1.55 | MC |
| SRR5856935 | leaf | control | 1.56 | MC |
| SRR5856936 | leaf | salt | 1.41 | MC |
| SRR5856937 | leaf | salt | 1.77 | MC |
| SRR5856938 | leaf | salt | 1.86 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.77 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 7.17 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 7.45 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.07 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.32 | MC |
| SRR6168973 | leaf | none (control) | 0.48 | MC |
| SRR6168974 | leaf | none (control) | 0.59 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.92 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.83 | MC |
| SRR6168979 | leaf | none (control) | 1.16 | MC |
| SRR6168980 | leaf | none (control) | 0.58 | MC |
| SRR6168981 | leaf | none (control) | 0.38 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.25 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR8582888 | panicle | AM | 1.32 | MC |
| SRR8582889 | panicle | AM | 1.02 | MC |
| SRR8582890 | panicle | AM | 1.27 | MC |
| SRR8582891 | panicle | PM | 5.45 | MC |
| SRR8582893 | panicle | PM | 4.61 | MC |
| SRR5110429 | panicle | Dawn | 3.87 | MC |
| SRR5110430 | panicle | Dawn | 5.00 | MC |
| SRR5110431 | panicle | Dawn | 3.85 | MC |
| SRR5110432 | panicle | Dawn | 2.78 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.72 | MC |
| SRR5110439 | panicle | Dawn + 7h | 3.60 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.39 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.86 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.82 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.37 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.39 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.84 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.02 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.05 | MC |
| SRR5126148 | root | "mock,1_day" | 0.27 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.33 | MC |
| SRR5126155 | root | "mock,7_days" | 0.33 | MC |
| SRR5126157 | root | "mock,7_days" | 0.43 | MC |
| SRR5126167 | root | "mock,14_days" | 0.35 | MC |
| SRR5126169 | root | "mock,14_days" | 0.35 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.43 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.73 | MC |
| SRR1213694 | root | wt | 1.23 | MC |
| SRR4947485 | root | Al | 1.70 | MC |
| SRR4947491 | root | Al | 2.99 | MC |
| SRR4947498 | root | Al | 3.66 | MC |
| SRR4947500 | root | Al | 1.03 | MC |
| SRR4947501 | root | Al | 1.40 | MC |
| SRR4947502 | root | control | 1.18 | MC |
| SRR4947504 | root | control | 2.64 | MC |
| SRR4947508 | root | Al | 1.05 | MC |
| SRR4947509 | root | Al | 0.80 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.39 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.94 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.96 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.34 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.43 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.22 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.24 | MC |
| SRR6441554 | seedling | wild_type | 0.76 | MC |
| SRR6441555 | seedling | wild_type | 3.13 | MC |
| SRR3098741 | seedling | wt | 1.17 | MC |
| SRR3098742 | seedling | wt | 1.53 | MC |
| SRR3098743 | seedling | wt | 1.02 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.39 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.74 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.86 | MC |
| SRR358793 | seedling | wt | 6.31 | MC |
| SRR358794 | seedling | wt | 4.75 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.81 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.69 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.71 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.93 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.28 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.57 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.54 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.84 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.55 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.71 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.37 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 4.14 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.21 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.60 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.74 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.66 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.61 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.43 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.90 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.69 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.62 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.91 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.05 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.81 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.01 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.28 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.23 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 4.34 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.57 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.72 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.61 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.62 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.52 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.96 | MC |