| SRR358795 | callus | wt | 3.86 | MC |
| SRR358796 | callus | wt | 3.62 | MC |
| SRR358797 | callus | wt | 2.11 | MC |
| SRR358798 | callus | wt | 2.48 | MC |
| SRR4947495 | root | control | 1.01 | MC |
| SRR7265400 | coleoptile | 2dA | 0.57 | MC |
| SRR7265401 | coleoptile | 2dA | 0.64 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.90 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.15 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.47 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.42 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.54 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.48 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.71 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.78 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.34 | MC |
| SRR7265388 | embryo | 12hA | 0.85 | MC |
| SRR7265389 | embryo | 12hA | 0.52 | MC |
| SRR7265390 | embryo | 12hA | 0.60 | MC |
| SRR7265394 | embryo | 24hA | 0.64 | MC |
| SRR7265395 | embryo | 24hA | 0.78 | MC |
| SRR7265396 | embryo | 24hA | 0.73 | MC |
| SRR7265397 | embryo | 24hN | 0.65 | MC |
| SRR7265398 | embryo | 24hN | 0.69 | MC |
| SRR7265399 | embryo | 24hN | 0.77 | MC |
| SRR504365 | leaf | wt | 0.32 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.21 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.25 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.24 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.21 | MC |
| SRR5856927 | leaf | control | 1.54 | MC |
| SRR5856928 | leaf | control | 1.68 | MC |
| SRR5856929 | leaf | control | 0.65 | MC |
| SRR5856936 | leaf | salt | 0.24 | MC |
| SRR5856937 | leaf | salt | 0.16 | MC |
| SRR5856938 | leaf | salt | 0.59 | MC |
| SRR4947496 | root | control | 1.43 | MC |
| SRR5126147 | root | "mock,1_day" | 1.41 | MC |
| SRR5126149 | root | "mock,1_day" | 2.70 | MC |
| SRR5126153 | root | "mock,7_days" | 3.06 | MC |
| SRR5126155 | root | "mock,7_days" | 4.30 | MC |
| SRR5126157 | root | "mock,7_days" | 3.73 | MC |
| SRR5126165 | root | "mock,14_days" | 2.85 | MC |
| SRR5126167 | root | "mock,14_days" | 0.92 | MC |
| SRR5126169 | root | "mock,14_days" | 3.43 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.60 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.46 | MC |
| SRR4947479 | root | control | 0.78 | MC |
| SRR4947480 | root | control | 0.72 | MC |
| SRR4947481 | root | control | 1.03 | MC |
| SRR4947482 | root | Al | 1.28 | MC |
| SRR4947483 | root | Al | 0.66 | MC |
| SRR4947484 | root | Al | 1.81 | MC |
| SRR4947485 | root | Al | 1.10 | MC |
| SRR4947487 | root | control | 1.24 | MC |
| SRR4947488 | root | control | 1.69 | MC |
| SRR4947489 | root | control | 1.07 | MC |
| SRR4947490 | root | Al | 0.62 | MC |
| SRR4947491 | root | Al | 0.89 | MC |
| SRR4947492 | root | Al | 2.40 | MC |
| SRR4947493 | root | Al | 2.16 | MC |
| SRR4947494 | root | control | 0.85 | MC |
| SRR4947497 | root | control | 1.15 | MC |
| SRR4947499 | root | Al | 1.04 | MC |
| SRR4947500 | root | Al | 1.81 | MC |
| SRR4947501 | root | Al | 2.17 | MC |
| SRR4947502 | root | control | 0.61 | MC |
| SRR4947503 | root | control | 0.80 | MC |
| SRR4947504 | root | control | 4.40 | MC |
| SRR4947505 | root | control | 1.81 | MC |
| SRR4947506 | root | Al | 0.53 | MC |
| SRR4947507 | root | Al | 0.53 | MC |
| SRR4947508 | root | Al | 1.70 | MC |
| SRR4947509 | root | Al | 1.94 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.21 | MC |
| SRR6502092 | root | 100 mM NaCl | 1.55 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.21 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.50 | MC |
| SRR6502104 | root | 100 mM NaCl | 1.45 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.84 | MC |
| SRR6502106 | root | control | 3.44 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.47 | MC |
| SRR2154082 | seedling | wt | 0.29 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.29 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.41 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.70 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.26 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.86 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.86 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.42 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.93 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.94 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.29 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.30 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.33 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.36 | MC |