| SRR4457255 | 2nd_leaf | DAH20 | 0.68 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.55 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.93 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.64 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.74 | MC |
| SRR3745126 | anther | wt | 0.49 | MC |
| SRR6320498 | carpel | wt | 1.57 | MC |
| SRR7265400 | coleoptile | 2dA | 1.02 | MC |
| SRR7265401 | coleoptile | 2dA | 0.76 | MC |
| SRR7265402 | coleoptile | 2dA | 0.89 | MC |
| SRR7265403 | coleoptile | 2dN | 1.60 | MC |
| SRR7265404 | coleoptile | 2dN | 0.96 | MC |
| SRR7265405 | coleoptile | 2dN | 1.79 | MC |
| SRR7265406 | coleoptile | 3dA | 1.58 | MC |
| SRR7265407 | coleoptile | 3dA | 1.38 | MC |
| SRR7265408 | coleoptile | 3dA | 1.40 | MC |
| SRR7265409 | coleoptile | 3dN | 0.83 | MC |
| SRR7265410 | coleoptile | 3dN | 0.75 | MC |
| SRR7265411 | coleoptile | 3dN | 0.82 | MC |
| SRR7265412 | coleoptile | 4dA | 1.13 | MC |
| SRR7265413 | coleoptile | 4dA | 0.63 | MC |
| SRR7265414 | coleoptile | 4dA | 1.63 | MC |
| SRR7265415 | coleoptile | 4dN | 2.26 | MC |
| SRR7265416 | coleoptile | 4dN | 1.14 | MC |
| SRR7265417 | coleoptile | 4dN | 0.95 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.17 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.28 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.20 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.38 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.20 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.94 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.43 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.05 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.07 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.86 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.38 | MC |
| SRR7265376 | embryo | 1hA | 0.67 | MC |
| SRR7265377 | embryo | 1hA | 0.56 | MC |
| SRR7265378 | embryo | 1hA | 1.19 | MC |
| SRR7265379 | embryo | 1hN | 0.64 | MC |
| SRR7265380 | embryo | 1hN | 1.57 | MC |
| SRR7265381 | embryo | 1hN | 1.16 | MC |
| SRR7265382 | embryo | 3hA | 2.71 | MC |
| SRR7265383 | embryo | 3hA | 2.21 | MC |
| SRR7265384 | embryo | 3hA | 2.20 | MC |
| SRR7265385 | embryo | 3hN | 1.68 | MC |
| SRR7265386 | embryo | 3hN | 1.13 | MC |
| SRR7265387 | embryo | 3hN | 0.63 | MC |
| SRR7265388 | embryo | 12hA | 1.79 | MC |
| SRR7265389 | embryo | 12hA | 2.72 | MC |
| SRR7265390 | embryo | 12hA | 1.44 | MC |
| SRR7265391 | embryo | 12hN | 1.64 | MC |
| SRR7265392 | embryo | 12hN | 1.83 | MC |
| SRR7265393 | embryo | 12hN | 1.63 | MC |
| SRR7265394 | embryo | 24hA | 3.15 | MC |
| SRR7265395 | embryo | 24hA | 2.02 | MC |
| SRR7265396 | embryo | 24hA | 1.34 | MC |
| SRR7265397 | embryo | 24hN | 2.25 | MC |
| SRR7265398 | embryo | 24hN | 1.72 | MC |
| SRR7265399 | embryo | 24hN | 1.37 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.40 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.13 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.98 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.44 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.27 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.51 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.79 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.88 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.64 | MC |
| SRR8240825 | leaf | wild_type | 0.25 | MC |
| SRR8240818 | leaf | wild_type | 0.37 | MC |
| SRR8240819 | leaf | wild_type | 0.39 | MC |
| SRR8240820 | leaf | wild_type | 0.24 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.04 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.82 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.14 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.54 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.84 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.89 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.68 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.28 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.24 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.30 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.27 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.11 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.52 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.67 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.03 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.24 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.59 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.91 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.90 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.72 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.88 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.22 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.68 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.42 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.90 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.39 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.02 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.96 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.02 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.96 | MC |
| SRR1761529 | leaf | drought | 1.02 | MC |
| SRR1761530 | leaf | control | 0.96 | MC |
| SRR504365 | leaf | wt | 0.36 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.55 | MC |
| SRR6417967 | leaf | H2O_control | 0.48 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.37 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.57 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.36 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.76 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.92 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.45 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.08 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.45 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.28 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.27 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.34 | MC |
| SRR1213693 | leaf | wt | 0.25 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.77 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.57 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.03 | MC |
| SRR6502088 | leaf | control | 2.37 | MC |
| SRR6502089 | leaf | control | 1.29 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.57 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.40 | MC |
| SRR6502100 | leaf | control | 2.36 | MC |
| SRR6502101 | leaf | control | 1.34 | MC |
| SRR6502102 | leaf | control | 1.52 | MC |
| SRR5856933 | leaf | control | 1.82 | MC |
| SRR5856935 | leaf | control | 1.29 | MC |
| SRR5856937 | leaf | salt | 1.75 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.44 | MC |
| SRR6168979 | leaf | none (control) | 0.62 | MC |
| SRR6168980 | leaf | none (control) | 0.21 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.33 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.25 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.26 | MC |
| SRR8582888 | panicle | AM | 0.44 | MC |
| SRR5110429 | panicle | Dawn | 0.67 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.59 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.34 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.01 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.76 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.41 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.50 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.44 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.26 | MC |
| SRR5126148 | root | "mock,1_day" | 0.29 | MC |
| SRR5126149 | root | "mock,1_day" | 0.49 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.05 | MC |
| SRR5126157 | root | "mock,7_days" | 0.38 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.57 | MC |
| SRR5126167 | root | "mock,14_days" | 0.41 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.53 | MC |
| SRR1213695 | root | wt | 0.26 | MC |
| SRR4947478 | root | control | 0.77 | MC |
| SRR4947485 | root | Al | 0.50 | MC |
| SRR4947487 | root | control | 0.64 | MC |
| SRR4947505 | root | control | 0.88 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.41 | MC |
| SRR6502106 | root | control | 2.23 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.83 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.19 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.33 | MC |
| SRR2154083 | seedling | wt | 2.20 | MC |
| SRR2154085 | seedling | wt | 0.86 | MC |
| SRR3098741 | seedling | wt | 0.46 | MC |
| SRR3098742 | seedling | wt | 0.30 | MC |
| SRR3098743 | seedling | wt | 0.19 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.92 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.06 | MC |
| SRR1944583 | seedling | no_treatment | 2.36 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.83 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.86 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.39 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.10 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.87 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.39 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.04 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.31 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.42 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.86 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.33 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.07 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.36 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.39 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.42 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.60 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.77 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.06 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.02 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.24 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.37 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.56 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.62 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.00 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.61 | MC |