| SRR4457250 | 2nd_leaf | DAH4 | 0.43 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.62 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.93 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.94 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.81 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.92 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.18 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 0.45 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.99 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.68 | MC |
| SRR7265404 | coleoptile | 2dN | 2.65 | MC |
| SRR7265412 | coleoptile | 4dA | 2.08 | MC |
| SRR7265413 | coleoptile | 4dA | 4.04 | MC |
| SRR7265414 | coleoptile | 4dA | 2.11 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.92 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.54 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.81 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.88 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.31 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.53 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.01 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.64 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.39 | MC |
| SRR7265376 | embryo | 1hA | 2.93 | MC |
| SRR7265377 | embryo | 1hA | 2.92 | MC |
| SRR7265378 | embryo | 1hA | 2.55 | MC |
| SRR7265380 | embryo | 1hN | 3.15 | MC |
| SRR7265382 | embryo | 3hA | 1.49 | MC |
| SRR7265383 | embryo | 3hA | 3.47 | MC |
| SRR7265384 | embryo | 3hA | 3.74 | MC |
| SRR7265386 | embryo | 3hN | 1.98 | MC |
| SRR7265387 | embryo | 3hN | 1.85 | MC |
| SRR7265392 | embryo | 12hN | 2.83 | MC |
| SRR7265393 | embryo | 12hN | 2.60 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.46 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.54 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.21 | MC |
| SRR4457235 | flag_leaf | DAH12 | 2.09 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.97 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.29 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.96 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.21 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.56 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.72 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.69 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.34 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.60 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.21 | MC |
| SRR8060835 | leaf | wild_type | 0.49 | MC |
| SRR8060837 | leaf | wild_type | 0.41 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.09 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.58 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.23 | MC |
| SRR504365 | leaf | wt | 0.20 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.62 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.99 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.42 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.26 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.82 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.43 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.10 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.82 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.95 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.88 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.44 | MC |
| SRR6502088 | leaf | control | 0.47 | MC |
| SRR5856927 | leaf | control | 1.92 | MC |
| SRR5856928 | leaf | control | 2.12 | MC |
| SRR5856929 | leaf | control | 2.06 | MC |
| SRR5856930 | leaf | salt | 1.01 | MC |
| SRR5856931 | leaf | salt | 1.28 | MC |
| SRR5856932 | leaf | salt | 1.36 | MC |
| SRR5856933 | leaf | control | 1.93 | MC |
| SRR5856935 | leaf | control | 1.79 | MC |
| SRR5856937 | leaf | salt | 1.03 | MC |
| SRR5856938 | leaf | salt | 1.44 | MC |
| SRR6168973 | leaf | none (control) | 0.82 | MC |
| SRR6168974 | leaf | none (control) | 1.22 | MC |
| SRR6168975 | leaf | none (control) | 0.37 | MC |
| SRR6168979 | leaf | none (control) | 0.49 | MC |
| SRR6168980 | leaf | none (control) | 0.23 | MC |
| SRR8582893 | panicle | PM | 0.54 | MC |
| SRR5126147 | root | "mock,1_day" | 1.19 | MC |
| SRR5126149 | root | "mock,1_day" | 0.42 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.89 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.89 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126155 | root | "mock,7_days" | 0.81 | MC |
| SRR5126157 | root | "mock,7_days" | 1.26 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.73 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.89 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.25 | MC |
| SRR5126165 | root | "mock,14_days" | 1.68 | MC |
| SRR5126167 | root | "mock,14_days" | 0.67 | MC |
| SRR5126169 | root | "mock,14_days" | 0.73 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.36 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.04 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.02 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.57 | MC |
| SRR1213695 | root | wt | 0.53 | MC |
| SRR4947482 | root | Al | 0.61 | MC |
| SRR4947483 | root | Al | 0.49 | MC |
| SRR4947484 | root | Al | 0.78 | MC |
| SRR4947487 | root | control | 0.97 | MC |
| SRR4947493 | root | Al | 1.08 | MC |
| SRR4947506 | root | Al | 0.45 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.47 | MC |
| SRR6502094 | root | control | 1.50 | MC |
| SRR6502095 | root | control | 1.10 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.89 | MC |
| SRR6502108 | root | control | 1.10 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.53 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.11 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.48 | MC |
| SRR6441554 | seedling | wild_type | 0.75 | MC |
| SRR6441555 | seedling | wild_type | 1.91 | MC |
| SRR2154086 | seedling | wt | 1.55 | MC |
| SRR2154084 | seedling | wt | 0.58 | MC |
| SRR2154085 | seedling | wt | 0.39 | MC |
| SRR2154087 | seedling | wt | 0.47 | MC |
| SRR3098741 | seedling | wt | 0.56 | MC |
| SRR3098742 | seedling | wt | 0.90 | MC |
| SRR3098743 | seedling | wt | 0.70 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.00 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.00 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.02 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.51 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.96 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.00 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.51 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.09 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.61 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.39 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.56 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.26 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.21 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.62 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.85 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.41 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.77 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.48 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.19 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.33 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.48 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.15 | MC |