| SRR5560727 | caryopsis | wild_type | 0.72 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.68 | MC |
| SRR7265400 | coleoptile | 2dA | 0.33 | MC |
| SRR7265401 | coleoptile | 2dA | 2.10 | MC |
| SRR7265402 | coleoptile | 2dA | 0.44 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.36 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.20 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.38 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.23 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.69 | MC |
| SRR2338867 | endosprem | control | 0.94 | MC |
| SRR8240825 | leaf | wild_type | 0.32 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.46 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.75 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.98 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.56 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.28 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.18 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.23 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.46 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.31 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.38 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.52 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.92 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.00 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.34 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.45 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.41 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.35 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.63 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.84 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.59 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.39 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.56 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.77 | MC |
| SRR1213692 | leaf | wt | 0.27 | MC |
| SRR1213693 | leaf | wt | 0.23 | MC |
| SRR6502088 | leaf | control | 0.42 | MC |
| SRR6502089 | leaf | control | 1.05 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.39 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.35 | MC |
| SRR6502101 | leaf | control | 0.43 | MC |
| SRR6502102 | leaf | control | 0.62 | MC |
| SRR5110429 | panicle | Dawn | 1.96 | MC |
| SRR5110430 | panicle | Dawn | 1.80 | MC |
| SRR5110431 | panicle | Dawn | 2.68 | MC |
| SRR5110432 | panicle | Dawn | 1.09 | MC |
| SRR4947496 | root | control | 0.66 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.87 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.26 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.47 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.62 | MC |
| SRR5110439 | panicle | Dawn + 7h | 3.11 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.46 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.56 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.94 | MC |
| SRR5110445 | panicle | Dusk | 1.79 | MC |
| SRR5110446 | panicle | Dusk | 0.64 | MC |
| SRR5110447 | panicle | Dusk | 1.03 | MC |
| SRR5110448 | panicle | Dusk | 0.58 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.73 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.10 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.32 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.88 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.62 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.07 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.44 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.60 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.18 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.33 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.50 | MC |
| SRR5126147 | root | "mock,1_day" | 3.07 | MC |
| SRR5126148 | root | "mock,1_day" | 0.52 | MC |
| SRR5126149 | root | "mock,1_day" | 1.33 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.34 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.16 | MC |
| SRR5126153 | root | "mock,7_days" | 1.67 | MC |
| SRR5126155 | root | "mock,7_days" | 1.17 | MC |
| SRR5126157 | root | "mock,7_days" | 1.11 | MC |
| SRR5126165 | root | "mock,14_days" | 2.06 | MC |
| SRR5126167 | root | "mock,14_days" | 0.71 | MC |
| SRR5126169 | root | "mock,14_days" | 1.99 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.61 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.19 | MC |
| SRR1213694 | root | wt | 0.23 | MC |
| SRR4947480 | root | control | 1.63 | MC |
| SRR4947481 | root | control | 0.63 | MC |
| SRR4947488 | root | control | 4.91 | MC |
| SRR4947489 | root | control | 4.61 | MC |
| SRR4947492 | root | Al | 3.15 | MC |
| SRR4947497 | root | control | 0.76 | MC |
| SRR4947501 | root | Al | 5.93 | MC |
| SRR4947504 | root | control | 2.28 | MC |
| SRR4947505 | root | control | 0.89 | MC |
| SRR6502094 | root | control | 2.81 | MC |
| SRR6502095 | root | control | 3.08 | MC |
| SRR6502096 | root | control | 4.45 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.85 | MC |
| SRR6502106 | root | control | 1.80 | MC |
| SRR6502107 | root | control | 2.54 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.61 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.65 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.53 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.27 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.13 | MC |
| SRR6441554 | seedling | wild_type | 0.40 | MC |
| SRR6441555 | seedling | wild_type | 0.68 | MC |
| SRR2154085 | seedling | wt | 0.76 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.53 | MC |
| SRR2857720 | seedling | drought_stress_1h | 0.64 | MC |
| SRR1944583 | seedling | no_treatment | 0.55 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.94 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.71 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.29 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.84 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.81 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.95 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.31 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.04 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.18 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.16 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.52 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.23 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.49 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.74 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.77 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.23 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.30 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.64 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.28 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.50 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.56 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.50 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.89 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.58 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.97 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.86 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.15 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.41 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.08 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.73 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.32 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.09 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.76 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.42 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.72 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.52 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.17 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.41 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.21 | MC |