| SRR4457249 | 2nd_leaf | DAH4 | 1.08 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.15 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.79 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 3.07 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.61 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.26 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.16 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.85 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.57 | MC |
| SRR358795 | callus | wt | 8.75 | MC |
| SRR6320473 | carpel | wt | 3.98 | MC |
| SRR6320498 | carpel | wt | 5.42 | MC |
| SRR5560727 | caryopsis | wild_type | 4.93 | MC |
| SRR5560728 | caryopsis | wild_type | 2.72 | MC |
| SRR5560729 | caryopsis | wild_type | 2.79 | MC |
| SRR4947495 | root | control | 4.05 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.48 | MC |
| SRR7265401 | coleoptile | 2dA | 3.58 | MC |
| SRR7265403 | coleoptile | 2dN | 1.40 | MC |
| SRR7265404 | coleoptile | 2dN | 0.96 | MC |
| SRR7265405 | coleoptile | 2dN | 0.39 | MC |
| SRR7265408 | coleoptile | 3dA | 1.85 | MC |
| SRR7265409 | coleoptile | 3dN | 0.58 | MC |
| SRR7265410 | coleoptile | 3dN | 0.56 | MC |
| SRR7265411 | coleoptile | 3dN | 0.57 | MC |
| SRR7265412 | coleoptile | 4dA | 1.33 | MC |
| SRR7265413 | coleoptile | 4dA | 2.95 | MC |
| SRR7265414 | coleoptile | 4dA | 3.18 | MC |
| SRR7265415 | coleoptile | 4dN | 0.65 | MC |
| SRR7265416 | coleoptile | 4dN | 0.56 | MC |
| SRR7265417 | coleoptile | 4dN | 0.64 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.68 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.29 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.72 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.84 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.24 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.51 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.45 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.42 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.15 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.93 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.82 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.72 | MC |
| SRR7265376 | embryo | 1hA | 1.02 | MC |
| SRR7265379 | embryo | 1hN | 1.66 | MC |
| SRR7265380 | embryo | 1hN | 1.82 | MC |
| SRR7265382 | embryo | 3hA | 1.47 | MC |
| SRR7265386 | embryo | 3hN | 0.45 | MC |
| SRR7265387 | embryo | 3hN | 1.62 | MC |
| SRR7265388 | embryo | 12hA | 1.08 | MC |
| SRR7265389 | embryo | 12hA | 1.15 | MC |
| SRR7265390 | embryo | 12hA | 0.58 | MC |
| SRR7265394 | embryo | 24hA | 4.44 | MC |
| SRR7265395 | embryo | 24hA | 4.83 | MC |
| SRR7265396 | embryo | 24hA | 0.93 | MC |
| SRR7265397 | embryo | 24hN | 1.74 | MC |
| SRR7265398 | embryo | 24hN | 1.87 | MC |
| SRR7265399 | embryo | 24hN | 1.24 | MC |
| SRR2338868 | endosprem | high_temperature | 2.38 | MC |
| SRR4457231 | flag_leaf | DAH4 | 3.17 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.76 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.43 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.36 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.24 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.54 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.18 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.40 | MC |
| SRR1213691 | flower | wt | 0.83 | MC |
| SRR8060835 | leaf | wild_type | 1.60 | MC |
| SRR8060836 | leaf | wild_type | 3.24 | MC |
| SRR8060837 | leaf | wild_type | 2.49 | MC |
| SRR8240824 | leaf | wild_type | 0.46 | MC |
| SRR8240825 | leaf | wild_type | 0.61 | MC |
| SRR8240826 | leaf | wild_type | 0.32 | MC |
| SRR8240818 | leaf | wild_type | 0.41 | MC |
| SRR8240819 | leaf | wild_type | 0.86 | MC |
| SRR8240820 | leaf | wild_type | 1.21 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.53 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.87 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.31 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.94 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.52 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.85 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.01 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.84 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.30 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.55 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.70 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.90 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.80 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.24 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.52 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.56 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.67 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.83 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.99 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.64 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.88 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.83 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.46 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.94 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.82 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.82 | MC |
| SRR1761530 | leaf | control | 5.82 | MC |
| SRR504365 | leaf | wt | 2.89 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.49 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.66 | MC |
| SRR6417968 | leaf | H2O_control | 0.50 | MC |
| SRR6417969 | leaf | H2O_control | 0.41 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.72 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.92 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.37 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.22 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.99 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.14 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.44 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.99 | MC |
| SRR1213693 | leaf | wt | 3.21 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR6502088 | leaf | control | 4.07 | MC |
| SRR6502089 | leaf | control | 4.16 | MC |
| SRR6502090 | leaf | control | 3.75 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.77 | MC |
| SRR6502100 | leaf | control | 2.16 | MC |
| SRR6502101 | leaf | control | 2.56 | MC |
| SRR6502102 | leaf | control | 2.59 | MC |
| SRR5856927 | leaf | control | 1.90 | MC |
| SRR5856929 | leaf | control | 1.14 | MC |
| SRR5856932 | leaf | salt | 1.66 | MC |
| SRR5856933 | leaf | control | 1.51 | MC |
| SRR5856934 | leaf | control | 1.95 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.10 | MC |
| SRR6168973 | leaf | none (control) | 0.89 | MC |
| SRR6168974 | leaf | none (control) | 0.74 | MC |
| SRR6168975 | leaf | none (control) | 0.49 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.18 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.39 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.46 | MC |
| SRR8582888 | panicle | AM | 1.13 | MC |
| SRR8582889 | panicle | AM | 0.36 | MC |
| SRR8582890 | panicle | AM | 0.32 | MC |
| SRR8582891 | panicle | PM | 2.14 | MC |
| SRR8582893 | panicle | PM | 1.62 | MC |
| SRR5110429 | panicle | Dawn | 1.96 | MC |
| SRR5110430 | panicle | Dawn | 5.52 | MC |
| SRR5110432 | panicle | Dawn | 1.79 | MC |
| SRR4947496 | root | control | 0.75 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.97 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.72 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.62 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.98 | MC |
| SRR5110445 | panicle | Dusk | 1.07 | MC |
| SRR5110447 | panicle | Dusk | 1.02 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.55 | MC |
| SRR5110451 | panicle | Dawn + 14h | 3.15 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.61 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.58 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.61 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.97 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.07 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.34 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.98 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.45 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.26 | MC |
| SRR1633182 | panicle | WT | 5.13 | MC |
| SRR5126148 | root | "mock,1_day" | 2.13 | MC |
| SRR5126149 | root | "mock,1_day" | 2.31 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.55 | MC |
| SRR5126157 | root | "mock,7_days" | 3.02 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.52 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.24 | MC |
| SRR1213694 | root | wt | 1.93 | MC |
| SRR4947478 | root | control | 2.05 | MC |
| SRR4947479 | root | control | 0.45 | MC |
| SRR4947481 | root | control | 1.30 | MC |
| SRR4947483 | root | Al | 1.50 | MC |
| SRR4947484 | root | Al | 1.79 | MC |
| SRR4947488 | root | control | 3.01 | MC |
| SRR4947489 | root | control | 4.59 | MC |
| SRR4947491 | root | Al | 1.94 | MC |
| SRR4947492 | root | Al | 1.68 | MC |
| SRR4947494 | root | control | 0.80 | MC |
| SRR4947498 | root | Al | 2.65 | MC |
| SRR4947499 | root | Al | 1.35 | MC |
| SRR4947501 | root | Al | 1.03 | MC |
| SRR4947505 | root | control | 1.99 | MC |
| SRR4947506 | root | Al | 2.17 | MC |
| SRR4947508 | root | Al | 3.34 | MC |
| SRR4947509 | root | Al | 1.33 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.01 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.34 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.75 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.37 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.20 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.92 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.19 | MC |
| SRR6441554 | seedling | wild_type | 1.20 | MC |
| SRR6441555 | seedling | wild_type | 2.69 | MC |
| SRR2154086 | seedling | wt | 4.44 | MC |
| SRR2154083 | seedling | wt | 1.91 | MC |
| SRR2154085 | seedling | wt | 4.45 | MC |
| SRR3098741 | seedling | wt | 1.50 | MC |
| SRR3098742 | seedling | wt | 1.44 | MC |
| SRR3098743 | seedling | wt | 1.28 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.37 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.93 | MC |
| SRR1944583 | seedling | no_treatment | 3.21 | MC |
| SRR358791 | seedling | wt | 6.97 | MC |
| SRR358792 | seedling | wt | 6.85 | MC |
| SRR358793 | seedling | wt | 4.72 | MC |
| SRR358794 | seedling | wt | 6.00 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.71 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.69 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.79 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.34 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.10 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.61 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.92 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.85 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.91 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.87 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.46 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.23 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.39 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.69 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.08 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.09 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.23 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.65 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.57 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.38 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.71 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 3.89 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.31 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.37 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.73 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.29 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.51 | MC |