| SRR4457255 | 2nd_leaf | DAH20 | 3.11 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.57 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.18 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.61 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.48 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.62 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 4.15 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.28 | MC |
| SRR3745125 | anther | wt | 2.67 | MC |
| SRR3745126 | anther | wt | 1.74 | MC |
| SRR3745127 | anther | wt | 2.60 | MC |
| SRR358795 | callus | wt | 5.14 | MC |
| SRR358797 | callus | wt | 2.52 | MC |
| SRR358798 | callus | wt | 1.69 | MC |
| SRR6320498 | carpel | wt | 3.84 | MC |
| SRR5560727 | caryopsis | wild_type | 1.90 | MC |
| SRR5560728 | caryopsis | wild_type | 2.37 | MC |
| SRR5560729 | caryopsis | wild_type | 1.71 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.55 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.60 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.84 | MC |
| SRR7265400 | coleoptile | 2dA | 2.72 | MC |
| SRR7265401 | coleoptile | 2dA | 2.17 | MC |
| SRR7265402 | coleoptile | 2dA | 2.13 | MC |
| SRR7265403 | coleoptile | 2dN | 1.21 | MC |
| SRR7265404 | coleoptile | 2dN | 0.54 | MC |
| SRR7265405 | coleoptile | 2dN | 1.15 | MC |
| SRR7265406 | coleoptile | 3dA | 1.55 | MC |
| SRR7265407 | coleoptile | 3dA | 1.26 | MC |
| SRR7265408 | coleoptile | 3dA | 1.15 | MC |
| SRR7265409 | coleoptile | 3dN | 0.81 | MC |
| SRR7265410 | coleoptile | 3dN | 0.83 | MC |
| SRR7265411 | coleoptile | 3dN | 0.73 | MC |
| SRR7265415 | coleoptile | 4dN | 1.20 | MC |
| SRR7265416 | coleoptile | 4dN | 0.98 | MC |
| SRR7265417 | coleoptile | 4dN | 0.69 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.17 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.57 | MC |
| SRR7265377 | embryo | 1hA | 0.33 | MC |
| SRR7265378 | embryo | 1hA | 0.39 | MC |
| SRR7265379 | embryo | 1hN | 1.08 | MC |
| SRR7265380 | embryo | 1hN | 0.93 | MC |
| SRR7265381 | embryo | 1hN | 0.68 | MC |
| SRR7265383 | embryo | 3hA | 0.65 | MC |
| SRR7265384 | embryo | 3hA | 0.34 | MC |
| SRR7265385 | embryo | 3hN | 1.01 | MC |
| SRR7265386 | embryo | 3hN | 0.31 | MC |
| SRR7265387 | embryo | 3hN | 0.87 | MC |
| SRR7265388 | embryo | 12hA | 0.77 | MC |
| SRR7265389 | embryo | 12hA | 1.03 | MC |
| SRR7265390 | embryo | 12hA | 1.27 | MC |
| SRR7265391 | embryo | 12hN | 0.65 | MC |
| SRR7265392 | embryo | 12hN | 0.71 | MC |
| SRR7265394 | embryo | 24hA | 1.45 | MC |
| SRR7265395 | embryo | 24hA | 0.85 | MC |
| SRR7265396 | embryo | 24hA | 0.85 | MC |
| SRR7265397 | embryo | 24hN | 1.69 | MC |
| SRR7265398 | embryo | 24hN | 1.02 | MC |
| SRR7265399 | embryo | 24hN | 1.56 | MC |
| SRR2338868 | endosprem | high_temperature | 1.14 | MC |
| SRR2338869 | endosprem | high_temperature | 2.27 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.54 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.35 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.15 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.38 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.83 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.38 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.91 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.51 | MC |
| SRR8240825 | leaf | wild_type | 2.56 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.44 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.17 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.33 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.30 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.07 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.39 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 3.35 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.50 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.68 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 3.35 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.50 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.68 | MC |
| SRR1761528 | leaf | drought | 3.35 | MC |
| SRR1761529 | leaf | drought | 2.50 | MC |
| SRR1761531 | leaf | control | 3.68 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 3.43 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.61 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.76 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.10 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.83 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.26 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.70 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.43 | MC |
| SRR6502089 | leaf | control | 3.06 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.93 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.75 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.21 | MC |
| SRR6502100 | leaf | control | 3.22 | MC |
| SRR6502101 | leaf | control | 2.31 | MC |
| SRR6502102 | leaf | control | 4.29 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.43 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 6.36 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 6.96 | MC |
| SRR6168973 | leaf | none (control) | 2.15 | MC |
| SRR6168974 | leaf | none (control) | 1.98 | MC |
| SRR6168975 | leaf | none (control) | 1.93 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.53 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.44 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.75 | MC |
| SRR6168979 | leaf | none (control) | 1.03 | MC |
| SRR6168980 | leaf | none (control) | 0.48 | MC |
| SRR6168981 | leaf | none (control) | 2.22 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.19 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.48 | MC |
| SRR8582888 | panicle | AM | 0.77 | MC |
| SRR8582889 | panicle | AM | 1.43 | MC |
| SRR8582891 | panicle | PM | 2.20 | MC |
| SRR8582892 | panicle | PM | 2.34 | MC |
| SRR5110431 | panicle | Dawn | 3.83 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.39 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.26 | MC |
| SRR5110439 | panicle | Dawn + 7h | 3.72 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.65 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.49 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 5.10 | MC |
| SRR5110445 | panicle | Dusk | 4.05 | MC |
| SRR5110449 | panicle | Dawn + 14h | 5.99 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.68 | MC |
| SRR5110452 | panicle | Dawn + 14h | 5.30 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.00 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.30 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.70 | MC |
| SRR5110459 | panicle | Dawn + 21h | 4.32 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.00 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 2.01 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.28 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.24 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.62 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.77 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.51 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 1.35 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.84 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.84 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.84 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.18 | MC |
| SRR6502096 | root | control | 0.61 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.22 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.84 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.80 | MC |
| SRR6502106 | root | control | 1.29 | MC |
| SRR6502107 | root | control | 1.14 | MC |
| SRR6502108 | root | control | 3.34 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.50 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.15 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.49 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.91 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.79 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.48 | MC |
| SRR6441554 | seedling | wild_type | 2.28 | MC |
| SRR6441555 | seedling | wild_type | 2.94 | MC |
| SRR358791 | seedling | wt | 6.83 | MC |
| SRR358792 | seedling | wt | 6.76 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.11 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.23 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.99 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.81 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.91 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.95 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.78 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.85 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 1.00 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.70 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.39 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 1.27 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.46 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.06 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.76 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.90 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.95 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.14 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.92 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.64 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.03 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.42 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.39 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.10 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.16 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.55 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.82 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.50 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.43 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.52 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.45 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.19 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.66 | MC |