| SRR4457249 | 2nd_leaf | DAH4 | 1.41 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.92 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.96 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.95 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.01 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.30 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.66 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.13 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 2.35 | MC |
| SRR5560727 | caryopsis | wild_type | 1.43 | MC |
| SRR5560728 | caryopsis | wild_type | 0.83 | MC |
| SRR5560729 | caryopsis | wild_type | 1.86 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.86 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.86 | MC |
| SRR7265400 | coleoptile | 2dA | 0.80 | MC |
| SRR7265403 | coleoptile | 2dN | 2.07 | MC |
| SRR7265404 | coleoptile | 2dN | 3.09 | MC |
| SRR7265405 | coleoptile | 2dN | 3.50 | MC |
| SRR7265406 | coleoptile | 3dA | 0.45 | MC |
| SRR7265410 | coleoptile | 3dN | 1.28 | MC |
| SRR7265412 | coleoptile | 4dA | 1.21 | MC |
| SRR7265416 | coleoptile | 4dN | 2.13 | MC |
| SRR7265417 | coleoptile | 4dN | 0.99 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.81 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.80 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.61 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.29 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.81 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.46 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.28 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.13 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.58 | MC |
| SRR7265387 | embryo | 3hN | 0.30 | MC |
| SRR7265388 | embryo | 12hA | 2.17 | MC |
| SRR7265389 | embryo | 12hA | 1.76 | MC |
| SRR7265390 | embryo | 12hA | 2.40 | MC |
| SRR7265391 | embryo | 12hN | 1.77 | MC |
| SRR7265392 | embryo | 12hN | 2.16 | MC |
| SRR7265393 | embryo | 12hN | 2.42 | MC |
| SRR7265394 | embryo | 24hA | 2.00 | MC |
| SRR7265395 | embryo | 24hA | 3.44 | MC |
| SRR7265396 | embryo | 24hA | 2.15 | MC |
| SRR7265397 | embryo | 24hN | 5.24 | MC |
| SRR7265398 | embryo | 24hN | 4.00 | MC |
| SRR7265399 | embryo | 24hN | 2.70 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.38 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.69 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.57 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.23 | MC |
| SRR4457237 | flag_leaf | DAH20 | 1.26 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.02 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.09 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.15 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.81 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.89 | MC |
| SRR4457243 | flag_leaf | DAH36 | 2.45 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.43 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.67 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.65 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.05 | MC |
| SRR1213691 | flower | wt | 0.93 | MC |
| SRR8060836 | leaf | wild_type | 1.88 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.96 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.48 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.36 | MC |
| SRR6417967 | leaf | H2O_control | 0.68 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.34 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.24 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.63 | MC |
| SRR5856930 | leaf | salt | 0.18 | MC |
| SRR5856932 | leaf | salt | 0.24 | MC |
| SRR5856933 | leaf | control | 0.45 | MC |
| SRR5856935 | leaf | control | 0.35 | MC |
| SRR5856936 | leaf | salt | 0.38 | MC |
| SRR5856937 | leaf | salt | 0.30 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.64 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 5.15 | MC |
| SRR4947496 | root | control | 0.96 | MC |
| SRR5110439 | panicle | Dawn + 7h | 3.61 | MC |
| SRR5110445 | panicle | Dusk | 0.85 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.83 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.08 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.62 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.72 | MC |
| SRR5126155 | root | "mock,7_days" | 0.77 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.07 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.27 | MC |
| SRR1213695 | root | wt | 0.41 | MC |
| SRR4947482 | root | Al | 0.59 | MC |
| SRR4947507 | root | Al | 1.51 | MC |
| SRR4947508 | root | Al | 2.06 | MC |
| SRR4947509 | root | Al | 1.27 | MC |
| SRR2154083 | seedling | wt | 2.94 | MC |
| SRR2154084 | seedling | wt | 3.02 | MC |
| SRR3098742 | seedling | wt | 0.74 | MC |
| SRR3098743 | seedling | wt | 0.84 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.14 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.43 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.04 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 1.93 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 1.58 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 1.75 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.39 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.96 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.75 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.84 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.02 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.66 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.27 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.85 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.72 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.87 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.07 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.74 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.64 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.25 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.81 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.07 | MC |