| SRR4457250 | 2nd_leaf | DAH4 | 0.59 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.32 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.25 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 1.57 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.92 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.44 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.08 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.02 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.90 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 2.81 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.69 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.57 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.08 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.75 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.13 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.25 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.72 | MC |
| SRR7265400 | coleoptile | 2dA | 2.91 | MC |
| SRR7265402 | coleoptile | 2dA | 1.95 | MC |
| SRR7265403 | coleoptile | 2dN | 1.87 | MC |
| SRR7265404 | coleoptile | 2dN | 2.24 | MC |
| SRR7265405 | coleoptile | 2dN | 0.91 | MC |
| SRR7265409 | coleoptile | 3dN | 1.78 | MC |
| SRR7265411 | coleoptile | 3dN | 2.74 | MC |
| SRR7265413 | coleoptile | 4dA | 1.00 | MC |
| SRR7265415 | coleoptile | 4dN | 3.10 | MC |
| SRR7265416 | coleoptile | 4dN | 1.52 | MC |
| SRR7265417 | coleoptile | 4dN | 2.22 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.94 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.43 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 0.75 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.62 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.05 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.94 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.63 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.94 | MC |
| SRR7265376 | embryo | 1hA | 3.03 | MC |
| SRR7265377 | embryo | 1hA | 1.91 | MC |
| SRR7265378 | embryo | 1hA | 2.06 | MC |
| SRR7265379 | embryo | 1hN | 1.49 | MC |
| SRR7265381 | embryo | 1hN | 1.51 | MC |
| SRR7265384 | embryo | 3hA | 1.13 | MC |
| SRR7265385 | embryo | 3hN | 2.15 | MC |
| SRR7265386 | embryo | 3hN | 0.63 | MC |
| SRR7265387 | embryo | 3hN | 0.43 | MC |
| SRR7265388 | embryo | 12hA | 2.27 | MC |
| SRR7265389 | embryo | 12hA | 4.57 | MC |
| SRR7265390 | embryo | 12hA | 2.87 | MC |
| SRR7265391 | embryo | 12hN | 1.96 | MC |
| SRR7265392 | embryo | 12hN | 1.91 | MC |
| SRR7265393 | embryo | 12hN | 1.50 | MC |
| SRR7265394 | embryo | 24hA | 4.89 | MC |
| SRR7265395 | embryo | 24hA | 3.24 | MC |
| SRR7265396 | embryo | 24hA | 2.57 | MC |
| SRR7265397 | embryo | 24hN | 1.08 | MC |
| SRR7265399 | embryo | 24hN | 3.47 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.46 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.91 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.25 | MC |
| SRR4457235 | flag_leaf | DAH12 | 1.63 | MC |
| SRR4457236 | flag_leaf | DAH12 | 1.67 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.83 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.01 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.29 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.00 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.47 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.13 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.45 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.44 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.81 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.65 | MC |
| SRR4457248 | flag_leaf | DAH44 | 3.36 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.32 | MC |
| SRR8060836 | leaf | wild_type | 0.72 | MC |
| SRR8060837 | leaf | wild_type | 0.41 | MC |
| SRR8240824 | leaf | wild_type | 1.32 | MC |
| SRR8240826 | leaf | wild_type | 1.30 | MC |
| SRR8240818 | leaf | wild_type | 0.53 | MC |
| SRR8240819 | leaf | wild_type | 0.39 | MC |
| SRR8240820 | leaf | wild_type | 1.27 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.35 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.78 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.11 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.78 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.48 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.62 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.62 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.61 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.35 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.19 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.41 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.40 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.01 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.36 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.75 | MC |
| SRR504365 | leaf | wt | 1.12 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.47 | MC |
| SRR6417967 | leaf | H2O_control | 2.02 | MC |
| SRR6417968 | leaf | H2O_control | 0.71 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.81 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.09 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.08 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.43 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.88 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.19 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.29 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.65 | MC |
| SRR1213693 | leaf | wt | 0.45 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.34 | MC |
| SRR6502102 | leaf | control | 2.03 | MC |
| SRR5856929 | leaf | control | 0.58 | MC |
| SRR5856932 | leaf | salt | 0.28 | MC |
| SRR5856933 | leaf | control | 0.48 | MC |
| SRR5856938 | leaf | salt | 0.23 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.89 | MC |
| SRR8582889 | panicle | AM | 0.44 | MC |
| SRR8582890 | panicle | AM | 0.35 | MC |
| SRR8582892 | panicle | PM | 0.90 | MC |
| SRR8582893 | panicle | PM | 0.60 | MC |
| SRR5110432 | panicle | Dawn | 0.74 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.45 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.79 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.58 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.32 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.41 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.75 | MC |
| SRR5126149 | root | "mock,1_day" | 2.49 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.35 | MC |
| SRR5126153 | root | "mock,7_days" | 0.61 | MC |
| SRR5126155 | root | "mock,7_days" | 0.44 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.57 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.93 | MC |
| SRR5126165 | root | "mock,14_days" | 1.45 | MC |
| SRR5126167 | root | "mock,14_days" | 1.84 | MC |
| SRR5126169 | root | "mock,14_days" | 0.49 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.44 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.52 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.57 | MC |
| SRR1213694 | root | wt | 0.52 | MC |
| SRR1213695 | root | wt | 0.51 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.04 | MC |
| SRR2154086 | seedling | wt | 0.61 | MC |
| SRR2154084 | seedling | wt | 0.66 | MC |
| SRR2154085 | seedling | wt | 0.78 | MC |
| SRR3098741 | seedling | wt | 0.70 | MC |
| SRR3098742 | seedling | wt | 0.46 | MC |
| SRR3098743 | seedling | wt | 0.52 | MC |
| SRR2857719 | seedling | drought_stress_0h | 0.52 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.58 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.82 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.82 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.84 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.15 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.66 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.46 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.98 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.87 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.24 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.66 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.40 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.84 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.12 | MC |