| SRR6320498 | carpel | wt | 5.32 | MC |
| SRR4947495 | root | control | 3.21 | MC |
| SRR7265412 | coleoptile | 4dA | 2.95 | MC |
| SRR7265413 | coleoptile | 4dA | 4.56 | MC |
| SRR7265414 | coleoptile | 4dA | 2.76 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.40 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.85 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.92 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.85 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.73 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.01 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.38 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.48 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.14 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.26 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.68 | MC |
| SRR7265382 | embryo | 3hA | 2.64 | MC |
| SRR7265383 | embryo | 3hA | 2.90 | MC |
| SRR7265384 | embryo | 3hA | 3.36 | MC |
| SRR7265385 | embryo | 3hN | 4.15 | MC |
| SRR7265387 | embryo | 3hN | 2.03 | MC |
| SRR7265392 | embryo | 12hN | 4.54 | MC |
| SRR7265393 | embryo | 12hN | 4.10 | MC |
| SRR976168 | flag_leaf | wild_type | 2.82 | MC |
| SRR8240824 | leaf | wild_type | 1.30 | MC |
| SRR8240825 | leaf | wild_type | 2.28 | MC |
| SRR8240826 | leaf | wild_type | 1.86 | MC |
| SRR8240819 | leaf | wild_type | 2.18 | MC |
| SRR8240820 | leaf | wild_type | 1.81 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.48 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.48 | MC |
| SRR1761528 | leaf | drought | 5.48 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.50 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.07 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.96 | MC |
| SRR5856927 | leaf | control | 1.20 | MC |
| SRR5856930 | leaf | salt | 0.85 | MC |
| SRR5856931 | leaf | salt | 1.58 | MC |
| SRR5856932 | leaf | salt | 1.54 | MC |
| SRR5856935 | leaf | control | 2.26 | MC |
| SRR5856937 | leaf | salt | 0.83 | MC |
| SRR5856938 | leaf | salt | 1.32 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.91 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.38 | MC |
| SRR6168974 | leaf | none (control) | 4.84 | MC |
| SRR6168975 | leaf | none (control) | 3.16 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.11 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 5.72 | MC |
| SRR6168979 | leaf | none (control) | 1.35 | MC |
| SRR6168981 | leaf | none (control) | 0.24 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.47 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.26 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.92 | MC |
| SRR1633182 | panicle | WT | 0.96 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.30 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 1.42 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.50 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.97 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.41 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.17 | MC |
| SRR5126147 | root | "mock,1_day" | 2.07 | MC |
| SRR5126148 | root | "mock,1_day" | 2.72 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.43 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.62 | MC |
| SRR4947478 | root | control | 2.36 | MC |
| SRR4947480 | root | control | 1.44 | MC |
| SRR4947481 | root | control | 4.24 | MC |
| SRR4947484 | root | Al | 3.21 | MC |
| SRR4947485 | root | Al | 2.98 | MC |
| SRR4947487 | root | control | 1.29 | MC |
| SRR4947488 | root | control | 2.74 | MC |
| SRR4947489 | root | control | 2.57 | MC |
| SRR4947490 | root | Al | 3.19 | MC |
| SRR4947491 | root | Al | 4.26 | MC |
| SRR4947492 | root | Al | 1.11 | MC |
| SRR4947494 | root | control | 2.10 | MC |
| SRR4947497 | root | control | 2.59 | MC |
| SRR4947498 | root | Al | 2.63 | MC |
| SRR4947500 | root | Al | 2.41 | MC |
| SRR4947501 | root | Al | 4.48 | MC |
| SRR4947502 | root | control | 2.74 | MC |
| SRR4947503 | root | control | 4.50 | MC |
| SRR4947504 | root | control | 2.22 | MC |
| SRR4947505 | root | control | 2.06 | MC |
| SRR4947506 | root | Al | 2.08 | MC |
| SRR4947507 | root | Al | 2.92 | MC |
| SRR4947508 | root | Al | 4.23 | MC |
| SRR4947509 | root | Al | 2.79 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.09 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.39 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.95 | MC |
| SRR6502095 | root | control | 1.38 | MC |
| SRR6502096 | root | control | 2.05 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.18 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.44 | MC |
| SRR6502106 | root | control | 2.89 | MC |
| SRR6502107 | root | control | 1.90 | MC |
| SRR6502108 | root | control | 2.58 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.15 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.04 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.77 | MC |
| SRR358793 | seedling | wt | 6.51 | MC |
| SRR358794 | seedling | wt | 6.56 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.18 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 4.52 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.56 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.97 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 5.32 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.88 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.15 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.04 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.87 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.31 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.18 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.91 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.48 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.76 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.16 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.62 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.45 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.88 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 1.40 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.02 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.43 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.72 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.46 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.92 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.05 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.31 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.52 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.44 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 2.59 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.61 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.13 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.25 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.78 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.87 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.03 | MC |