| SRR4457249 | 2nd_leaf | DAH4 | 4.71 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.61 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.61 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 3.28 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.90 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 3.11 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.80 | MC |
| SRR3745125 | anther | wt | 3.27 | MC |
| SRR3745126 | anther | wt | 2.51 | MC |
| SRR3745127 | anther | wt | 5.19 | MC |
| SRR358795 | callus | wt | 3.83 | MC |
| SRR358796 | callus | wt | 3.65 | MC |
| SRR358797 | callus | wt | 4.14 | MC |
| SRR358798 | callus | wt | 4.15 | MC |
| SRR6320473 | carpel | wt | 2.29 | MC |
| SRR6320498 | carpel | wt | 2.01 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.28 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.78 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.07 | MC |
| SRR4947495 | root | control | 3.69 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.47 | MC |
| SRR7265400 | coleoptile | 2dA | 0.34 | MC |
| SRR7265401 | coleoptile | 2dA | 0.36 | MC |
| SRR7265404 | coleoptile | 2dN | 0.30 | MC |
| SRR7265405 | coleoptile | 2dN | 0.42 | MC |
| SRR7265406 | coleoptile | 3dA | 0.52 | MC |
| SRR7265407 | coleoptile | 3dA | 0.32 | MC |
| SRR7265408 | coleoptile | 3dA | 0.44 | MC |
| SRR7265412 | coleoptile | 4dA | 0.63 | MC |
| SRR7265413 | coleoptile | 4dA | 1.32 | MC |
| SRR7265414 | coleoptile | 4dA | 1.54 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.35 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.71 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.02 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.92 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.18 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.30 | MC |
| SRR7265376 | embryo | 1hA | 0.42 | MC |
| SRR7265377 | embryo | 1hA | 0.65 | MC |
| SRR7265378 | embryo | 1hA | 0.57 | MC |
| SRR7265379 | embryo | 1hN | 0.73 | MC |
| SRR7265380 | embryo | 1hN | 0.83 | MC |
| SRR7265381 | embryo | 1hN | 0.97 | MC |
| SRR7265382 | embryo | 3hA | 0.88 | MC |
| SRR7265383 | embryo | 3hA | 0.68 | MC |
| SRR7265384 | embryo | 3hA | 0.79 | MC |
| SRR7265385 | embryo | 3hN | 0.71 | MC |
| SRR7265386 | embryo | 3hN | 0.52 | MC |
| SRR7265387 | embryo | 3hN | 0.71 | MC |
| SRR7265388 | embryo | 12hA | 0.46 | MC |
| SRR7265389 | embryo | 12hA | 0.53 | MC |
| SRR7265390 | embryo | 12hA | 0.63 | MC |
| SRR7265391 | embryo | 12hN | 0.62 | MC |
| SRR7265392 | embryo | 12hN | 0.79 | MC |
| SRR7265393 | embryo | 12hN | 0.69 | MC |
| SRR7265394 | embryo | 24hA | 0.68 | MC |
| SRR7265396 | embryo | 24hA | 0.60 | MC |
| SRR7265397 | embryo | 24hN | 0.55 | MC |
| SRR7265398 | embryo | 24hN | 0.86 | MC |
| SRR7265399 | embryo | 24hN | 0.56 | MC |
| SRR2338866 | endosprem | control | 1.90 | MC |
| SRR2338867 | endosprem | control | 1.36 | MC |
| SRR2338868 | endosprem | high_temperature | 2.11 | MC |
| SRR2338869 | endosprem | high_temperature | 2.37 | MC |
| SRR4457239 | flag_leaf | DAH20 | 4.21 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.24 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.23 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.93 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.28 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.78 | MC |
| SRR8240824 | leaf | wild_type | 2.35 | MC |
| SRR8240826 | leaf | wild_type | 1.88 | MC |
| SRR8240818 | leaf | wild_type | 1.66 | MC |
| SRR8240819 | leaf | wild_type | 1.89 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.36 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.11 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.06 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.92 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.77 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.22 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.41 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.11 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.34 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.77 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.51 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.46 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.69 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.51 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.46 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.69 | MC |
| SRR1761528 | leaf | drought | 4.51 | MC |
| SRR1761530 | leaf | control | 4.46 | MC |
| SRR1761531 | leaf | control | 4.69 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.15 | MC |
| SRR6417967 | leaf | H2O_control | 3.08 | MC |
| SRR6417969 | leaf | H2O_control | 3.28 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.40 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.14 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.73 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.75 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.17 | MC |
| SRR6502090 | leaf | control | 3.72 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 4.12 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.36 | MC |
| SRR6502100 | leaf | control | 3.48 | MC |
| SRR6502101 | leaf | control | 3.33 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.84 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.15 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 10.45 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 6.79 | MC |
| SRR6168973 | leaf | none (control) | 2.99 | MC |
| SRR6168974 | leaf | none (control) | 2.46 | MC |
| SRR6168975 | leaf | none (control) | 4.55 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.40 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.61 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 4.33 | MC |
| SRR6168979 | leaf | none (control) | 0.82 | MC |
| SRR6168980 | leaf | none (control) | 0.28 | MC |
| SRR6168981 | leaf | none (control) | 1.75 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.20 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.92 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.41 | MC |
| SRR8582890 | panicle | AM | 2.51 | MC |
| SRR5110429 | panicle | Dawn | 3.84 | MC |
| SRR5110430 | panicle | Dawn | 4.44 | MC |
| SRR5110431 | panicle | Dawn | 3.41 | MC |
| SRR5110432 | panicle | Dawn | 3.77 | MC |
| SRR4947496 | root | control | 3.68 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.44 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.48 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 3.63 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.08 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 4.42 | MC |
| SRR5110445 | panicle | Dusk | 3.57 | MC |
| SRR5110449 | panicle | Dawn + 14h | 6.25 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.68 | MC |
| SRR5110458 | panicle | Dawn + 21h | 3.00 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.81 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.06 | MC |
| SRR1633182 | panicle | WT | 2.49 | MC |
| SRR1633185 | panicle | WT | 4.05 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.42 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.38 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.59 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 4.86 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.27 | MC |
| SRR5126147 | root | "mock,1_day" | 3.48 | MC |
| SRR5126148 | root | "mock,1_day" | 2.83 | MC |
| SRR5126149 | root | "mock,1_day" | 3.58 | MC |
| SRR5126153 | root | "mock,7_days" | 3.31 | MC |
| SRR5126155 | root | "mock,7_days" | 3.22 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.09 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.61 | MC |
| SRR5126165 | root | "mock,14_days" | 4.01 | MC |
| SRR5126167 | root | "mock,14_days" | 3.76 | MC |
| SRR5126169 | root | "mock,14_days" | 4.36 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.85 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.33 | MC |
| SRR4947478 | root | control | 3.27 | MC |
| SRR4947479 | root | control | 2.98 | MC |
| SRR4947480 | root | control | 3.50 | MC |
| SRR4947481 | root | control | 5.66 | MC |
| SRR4947482 | root | Al | 3.20 | MC |
| SRR4947483 | root | Al | 3.18 | MC |
| SRR4947484 | root | Al | 3.27 | MC |
| SRR4947485 | root | Al | 3.63 | MC |
| SRR4947487 | root | control | 3.64 | MC |
| SRR4947488 | root | control | 4.85 | MC |
| SRR4947489 | root | control | 4.45 | MC |
| SRR4947490 | root | Al | 3.32 | MC |
| SRR4947491 | root | Al | 3.74 | MC |
| SRR4947492 | root | Al | 3.33 | MC |
| SRR4947493 | root | Al | 2.39 | MC |
| SRR4947494 | root | control | 3.41 | MC |
| SRR4947497 | root | control | 4.87 | MC |
| SRR4947498 | root | Al | 5.19 | MC |
| SRR4947499 | root | Al | 3.59 | MC |
| SRR4947500 | root | Al | 3.65 | MC |
| SRR4947501 | root | Al | 5.68 | MC |
| SRR4947506 | root | Al | 4.02 | MC |
| SRR4947508 | root | Al | 3.28 | MC |
| SRR4947509 | root | Al | 2.19 | MC |
| SRR6502093 | root | 100 mM NaCl | 5.32 | MC |
| SRR6502094 | root | control | 4.07 | MC |
| SRR6502095 | root | control | 3.85 | MC |
| SRR6502096 | root | control | 2.05 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.19 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.91 | MC |
| SRR6502106 | root | control | 3.49 | MC |
| SRR6502107 | root | control | 2.65 | MC |
| SRR6502108 | root | control | 3.58 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.57 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.91 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.19 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.09 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.79 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.79 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.05 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.66 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.10 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.64 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.10 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.08 | MC |
| SRR1944583 | seedling | no_treatment | 2.24 | MC |
| SRR358791 | seedling | wt | 3.70 | MC |
| SRR358792 | seedling | wt | 4.08 | MC |
| SRR358793 | seedling | wt | 2.98 | MC |
| SRR358794 | seedling | wt | 3.28 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.87 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.92 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.06 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.23 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.71 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.73 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.19 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.91 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.40 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.31 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.27 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.41 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.62 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.60 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.43 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.73 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.14 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.92 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.98 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.07 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.19 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.49 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.85 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.56 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.87 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.25 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.34 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.52 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.34 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.55 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.85 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.64 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.09 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.52 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.59 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.24 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.88 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.23 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.42 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 2.92 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.07 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 3.73 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.58 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.46 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.43 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.52 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.22 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.47 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.35 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.00 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.64 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.81 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.57 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.71 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 4.22 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.09 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.27 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.17 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.10 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.66 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.79 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.89 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.61 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.02 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.43 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.28 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.93 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.82 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.21 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.98 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.71 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.77 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.73 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 3.45 | MC |