| SRR4457249 | 2nd_leaf | DAH4 | 2.14 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.51 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.90 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.88 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.98 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.80 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.63 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.43 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.57 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.62 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.81 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.68 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.48 | MC |
| SRR3745126 | anther | wt | 0.46 | MC |
| SRR358795 | callus | wt | 6.78 | MC |
| SRR358796 | callus | wt | 6.92 | MC |
| SRR358797 | callus | wt | 4.50 | MC |
| SRR358798 | callus | wt | 3.96 | MC |
| SRR6320498 | carpel | wt | 6.11 | MC |
| SRR5560727 | caryopsis | wild_type | 1.96 | MC |
| SRR5560728 | caryopsis | wild_type | 2.79 | MC |
| SRR5560729 | caryopsis | wild_type | 1.65 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.37 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.60 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.97 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.97 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.34 | MC |
| SRR7265376 | embryo | 1hA | 0.73 | MC |
| SRR7265377 | embryo | 1hA | 0.71 | MC |
| SRR7265378 | embryo | 1hA | 0.52 | MC |
| SRR7265379 | embryo | 1hN | 1.04 | MC |
| SRR7265380 | embryo | 1hN | 0.48 | MC |
| SRR7265381 | embryo | 1hN | 0.87 | MC |
| SRR7265383 | embryo | 3hA | 0.63 | MC |
| SRR7265384 | embryo | 3hA | 0.47 | MC |
| SRR7265385 | embryo | 3hN | 0.51 | MC |
| SRR7265386 | embryo | 3hN | 0.50 | MC |
| SRR7265387 | embryo | 3hN | 0.53 | MC |
| SRR2338867 | endosprem | control | 0.63 | MC |
| SRR2338869 | endosprem | high_temperature | 0.74 | MC |
| SRR4457231 | flag_leaf | DAH4 | 1.60 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.43 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.66 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.45 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.95 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.71 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.37 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.62 | MC |
| SRR4457240 | flag_leaf | DAH28 | 0.82 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.10 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.61 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.69 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.33 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.51 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.50 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.70 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.97 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.51 | MC |
| SRR1213691 | flower | wt | 0.49 | MC |
| SRR8240824 | leaf | wild_type | 0.86 | MC |
| SRR8240825 | leaf | wild_type | 0.50 | MC |
| SRR8240826 | leaf | wild_type | 0.73 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.40 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.52 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 0.56 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.69 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.39 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.17 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.32 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.56 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.90 | MC |
| SRR504365 | leaf | wt | 0.57 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.42 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.71 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.83 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.62 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.28 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.44 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.52 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 1.27 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.27 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.22 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.58 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.34 | MC |
| SRR1213692 | leaf | wt | 0.29 | MC |
| SRR1213693 | leaf | wt | 0.40 | MC |
| SRR5856927 | leaf | control | 0.28 | MC |
| SRR5856930 | leaf | salt | 0.42 | MC |
| SRR5856931 | leaf | salt | 0.28 | MC |
| SRR5856932 | leaf | salt | 0.34 | MC |
| SRR5856934 | leaf | control | 0.24 | MC |
| SRR5856936 | leaf | salt | 0.30 | MC |
| SRR5856937 | leaf | salt | 0.33 | MC |
| SRR5856938 | leaf | salt | 0.54 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 3.20 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.06 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.46 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 0.99 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.04 | MC |
| SRR6168974 | leaf | none (control) | 2.62 | MC |
| SRR6168975 | leaf | none (control) | 2.75 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 2.78 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 1.58 | MC |
| SRR6168979 | leaf | none (control) | 0.79 | MC |
| SRR6168980 | leaf | none (control) | 0.99 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.97 | MC |
| SRR8582889 | panicle | AM | 0.35 | MC |
| SRR8582890 | panicle | AM | 0.21 | MC |
| SRR8582891 | panicle | PM | 2.40 | MC |
| SRR8582892 | panicle | PM | 2.40 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.46 | MC |
| SRR5110447 | panicle | Dusk | 0.38 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.36 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.24 | MC |
| SRR1633182 | panicle | WT | 0.62 | MC |
| SRR1633185 | panicle | WT | 0.55 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.53 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.99 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.88 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.64 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.52 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 1.11 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.58 | MC |
| SRR5126155 | root | "mock,7_days" | 0.37 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.64 | MC |
| SRR1213695 | root | wt | 0.26 | MC |
| SRR4947483 | root | Al | 0.40 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.30 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.18 | MC |
| SRR2154086 | seedling | wt | 0.43 | MC |
| SRR2154082 | seedling | wt | 0.33 | MC |
| SRR3098741 | seedling | wt | 0.54 | MC |
| SRR3098742 | seedling | wt | 0.80 | MC |
| SRR3098743 | seedling | wt | 0.99 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.40 | MC |
| SRR358791 | seedling | wt | 0.60 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.21 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 3.68 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.75 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.38 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.16 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.34 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.49 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.31 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.29 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.34 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.50 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.85 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.68 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.75 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.39 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.52 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.49 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.35 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.57 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.13 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.57 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.35 | MC |