| SRR4457249 | 2nd_leaf | DAH4 | 5.01 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 3.49 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 4.69 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 3.36 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.33 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.85 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 2.55 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.60 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.00 | MC |
| SRR3745125 | anther | wt | 1.00 | MC |
| SRR3745126 | anther | wt | 1.59 | MC |
| SRR3745127 | anther | wt | 1.72 | MC |
| SRR358795 | callus | wt | 9.71 | MC |
| SRR358796 | callus | wt | 8.65 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.07 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.28 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.21 | MC |
| SRR4947495 | root | control | 0.62 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 1.64 | MC |
| SRR7265400 | coleoptile | 2dA | 2.69 | MC |
| SRR7265401 | coleoptile | 2dA | 2.41 | MC |
| SRR7265402 | coleoptile | 2dA | 2.44 | MC |
| SRR7265406 | coleoptile | 3dA | 1.49 | MC |
| SRR7265407 | coleoptile | 3dA | 1.33 | MC |
| SRR7265408 | coleoptile | 3dA | 0.86 | MC |
| SRR7265410 | coleoptile | 3dN | 3.52 | MC |
| SRR7265412 | coleoptile | 4dA | 3.30 | MC |
| SRR7265413 | coleoptile | 4dA | 5.00 | MC |
| SRR7265414 | coleoptile | 4dA | 4.03 | MC |
| SRR7265415 | coleoptile | 4dN | 4.61 | MC |
| SRR7265416 | coleoptile | 4dN | 3.89 | MC |
| SRR7265417 | coleoptile | 4dN | 3.77 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.35 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.51 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.85 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.58 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.36 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.47 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.88 | MC |
| SRR7265389 | embryo | 12hA | 4.93 | MC |
| SRR7265394 | embryo | 24hA | 2.77 | MC |
| SRR7265395 | embryo | 24hA | 5.04 | MC |
| SRR7265396 | embryo | 24hA | 4.21 | MC |
| SRR2338866 | endosprem | control | 2.63 | MC |
| SRR976168 | flag_leaf | wild_type | 1.65 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.99 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.85 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.10 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.67 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.17 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.74 | MC |
| SRR4457244 | flag_leaf | DAH36 | 3.43 | MC |
| SRR4457245 | flag_leaf | DAH36 | 3.32 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.35 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.90 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.87 | MC |
| SRR1213691 | flower | wt | 3.86 | MC |
| SRR8060835 | leaf | wild_type | 0.71 | MC |
| SRR8060836 | leaf | wild_type | 0.50 | MC |
| SRR8060837 | leaf | wild_type | 0.94 | MC |
| SRR8240824 | leaf | wild_type | 0.56 | MC |
| SRR8240825 | leaf | wild_type | 0.65 | MC |
| SRR8240826 | leaf | wild_type | 0.98 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.18 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.29 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.10 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.89 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.12 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.53 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 5.62 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 5.56 | MC |
| SRR1761531 | leaf | control | 5.53 | MC |
| SRR6417967 | leaf | H2O_control | 3.84 | MC |
| SRR6417968 | leaf | H2O_control | 3.08 | MC |
| SRR6417969 | leaf | H2O_control | 3.26 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.76 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.47 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.47 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.71 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.56 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.09 | MC |
| SRR1213692 | leaf | wt | 2.36 | MC |
| SRR1213693 | leaf | wt | 3.75 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 4.37 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.48 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.81 | MC |
| SRR6502088 | leaf | control | 3.00 | MC |
| SRR6502089 | leaf | control | 3.63 | MC |
| SRR6502090 | leaf | control | 3.67 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.03 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.04 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.08 | MC |
| SRR6502100 | leaf | control | 2.53 | MC |
| SRR6502101 | leaf | control | 2.43 | MC |
| SRR6502102 | leaf | control | 2.49 | MC |
| SRR5856938 | leaf | salt | 0.16 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.21 | MC |
| SRR8582888 | panicle | AM | 1.26 | MC |
| SRR8582889 | panicle | AM | 0.79 | MC |
| SRR8582890 | panicle | AM | 1.63 | MC |
| SRR8582891 | panicle | PM | 5.32 | MC |
| SRR8582892 | panicle | PM | 4.60 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.47 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.48 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.32 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.27 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.44 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.40 | MC |
| SRR1633182 | panicle | WT | 3.08 | MC |
| SRR1633185 | panicle | WT | 3.65 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.14 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.22 | MC |
| SRR4947487 | root | control | 0.51 | MC |
| SRR4947489 | root | control | 0.47 | MC |
| SRR4947490 | root | Al | 0.57 | MC |
| SRR4947506 | root | Al | 0.46 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.20 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.99 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.47 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.68 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.57 | MC |
| SRR1740433 | root_elongation_zone | wt | 3.16 | MC |
| SRR1740428 | root_meristematic_zone | wt | 3.50 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.52 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.53 | MC |
| SRR1944583 | seedling | no_treatment | 2.71 | MC |
| SRR358791 | seedling | wt | 4.75 | MC |
| SRR358792 | seedling | wt | 3.96 | MC |
| SRR358794 | seedling | wt | 1.24 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.15 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 11.13 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.10 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.75 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.31 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.60 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.15 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.62 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.36 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.80 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.96 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.75 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.12 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.04 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.75 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.91 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.16 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 0.74 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 1.82 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.05 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.76 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.23 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.85 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.39 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.05 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.38 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.88 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.26 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.03 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.91 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.48 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.77 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 7.10 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.43 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 7.14 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.77 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.04 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.81 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.61 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.51 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.72 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 0.92 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.60 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.48 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.54 | MC |