| SRR3745125 | anther | wt | 2.73 | MC |
| SRR6320498 | carpel | wt | 1.27 | MC |
| SRR5560727 | caryopsis | wild_type | 1.32 | MC |
| SRR5560728 | caryopsis | wild_type | 1.68 | MC |
| SRR5560729 | caryopsis | wild_type | 2.86 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.78 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.24 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.05 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.38 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.35 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.75 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.50 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.25 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.87 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.24 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.64 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.47 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.91 | MC |
| SRR7265379 | embryo | 1hN | 1.11 | MC |
| SRR7265382 | embryo | 3hA | 2.61 | MC |
| SRR7265384 | embryo | 3hA | 1.71 | MC |
| SRR7265385 | embryo | 3hN | 2.93 | MC |
| SRR7265386 | embryo | 3hN | 2.24 | MC |
| SRR7265387 | embryo | 3hN | 2.40 | MC |
| SRR2338868 | endosprem | high_temperature | 1.08 | MC |
| SRR2338869 | endosprem | high_temperature | 1.13 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.42 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.72 | MC |
| SRR1213691 | flower | wt | 3.30 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.25 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.07 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.96 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.88 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.87 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.56 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.68 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 1.67 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 1.45 | MC |
| SRR1213693 | leaf | wt | 0.37 | MC |
| SRR5856927 | leaf | control | 0.48 | MC |
| SRR5856928 | leaf | control | 0.46 | MC |
| SRR5856929 | leaf | control | 0.28 | MC |
| SRR5856932 | leaf | salt | 0.52 | MC |
| SRR5856935 | leaf | control | 0.55 | MC |
| SRR5856936 | leaf | salt | 0.13 | MC |
| SRR5856938 | leaf | salt | 0.30 | MC |
| SRR6168973 | leaf | none (control) | 2.26 | MC |
| SRR6168974 | leaf | none (control) | 2.24 | MC |
| SRR6168975 | leaf | none (control) | 2.05 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 3.74 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.58 | MC |
| SRR8582891 | panicle | PM | 1.68 | MC |
| SRR8582893 | panicle | PM | 0.68 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.91 | MC |
| SRR5110446 | panicle | Dusk | 1.34 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.87 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.55 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.40 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.31 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.87 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.56 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 2.08 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.75 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.25 | MC |
| SRR5126147 | root | "mock,1_day" | 1.06 | MC |
| SRR5126148 | root | "mock,1_day" | 0.85 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.68 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.42 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.60 | MC |
| SRR5126153 | root | "mock,7_days" | 1.70 | MC |
| SRR5126155 | root | "mock,7_days" | 2.05 | MC |
| SRR5126157 | root | "mock,7_days" | 3.14 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.75 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.11 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.32 | MC |
| SRR5126165 | root | "mock,14_days" | 2.05 | MC |
| SRR5126167 | root | "mock,14_days" | 1.31 | MC |
| SRR5126169 | root | "mock,14_days" | 2.16 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.83 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.18 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.10 | MC |
| SRR1213694 | root | wt | 0.36 | MC |
| SRR1213695 | root | wt | 0.15 | MC |
| SRR4947478 | root | control | 0.94 | MC |
| SRR4947481 | root | control | 2.34 | MC |
| SRR4947482 | root | Al | 0.70 | MC |
| SRR4947485 | root | Al | 2.01 | MC |
| SRR4947489 | root | control | 1.33 | MC |
| SRR4947490 | root | Al | 0.57 | MC |
| SRR4947492 | root | Al | 0.75 | MC |
| SRR4947497 | root | control | 3.91 | MC |
| SRR4947500 | root | Al | 2.88 | MC |
| SRR4947501 | root | Al | 1.98 | MC |
| SRR4947502 | root | control | 1.78 | MC |
| SRR4947503 | root | control | 0.47 | MC |
| SRR4947508 | root | Al | 1.99 | MC |
| SRR4947509 | root | Al | 0.79 | MC |
| SRR6502094 | root | control | 1.46 | MC |
| SRR6502107 | root | control | 1.69 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.87 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.00 | MC |
| SRR6441554 | seedling | wild_type | 0.31 | MC |
| SRR6441555 | seedling | wild_type | 0.39 | MC |
| SRR2154086 | seedling | wt | 1.72 | MC |
| SRR2154082 | seedling | wt | 1.22 | MC |
| SRR2154083 | seedling | wt | 0.88 | MC |
| SRR2154084 | seedling | wt | 0.56 | MC |
| SRR2154087 | seedling | wt | 1.84 | MC |
| SRR3098741 | seedling | wt | 1.31 | MC |
| SRR3098742 | seedling | wt | 0.72 | MC |
| SRR3098743 | seedling | wt | 1.03 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.32 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.47 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.80 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.26 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.40 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.75 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.33 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.68 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.34 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.57 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.70 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.67 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.98 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.21 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.94 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.89 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.16 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.32 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 4.64 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 8.11 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.75 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 4.73 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.38 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.99 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.80 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.21 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 6.28 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.57 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 4.61 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 8.22 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.04 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.94 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.74 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.34 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.44 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.33 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.07 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.19 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.86 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.41 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.48 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.62 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.30 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.87 | MC |