| SRR3745125 | anther | wt | 0.79 | MC |
| SRR3745126 | anther | wt | 1.26 | MC |
| SRR3745127 | anther | wt | 1.38 | MC |
| SRR358795 | callus | wt | 8.84 | MC |
| SRR358796 | callus | wt | 6.46 | MC |
| SRR358797 | callus | wt | 8.00 | MC |
| SRR358798 | callus | wt | 7.67 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.61 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.09 | MC |
| SRR2338866 | endosprem | control | 4.28 | MC |
| SRR2338869 | endosprem | high_temperature | 2.75 | MC |
| SRR976168 | flag_leaf | wild_type | 1.42 | MC |
| SRR8240824 | leaf | wild_type | 1.92 | MC |
| SRR8240825 | leaf | wild_type | 0.74 | MC |
| SRR8240826 | leaf | wild_type | 0.84 | MC |
| SRR8240818 | leaf | wild_type | 0.74 | MC |
| SRR8240819 | leaf | wild_type | 0.48 | MC |
| SRR8240820 | leaf | wild_type | 0.68 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.18 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.61 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.70 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.30 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.74 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.94 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.77 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.84 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.84 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.51 | MC |
| SRR1761528 | leaf | drought | 2.84 | MC |
| SRR1761529 | leaf | drought | 4.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.77 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.70 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.58 | MC |
| SRR6417967 | leaf | H2O_control | 3.16 | MC |
| SRR6417968 | leaf | H2O_control | 2.34 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.61 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.32 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 3.31 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.45 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.53 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.18 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.36 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.43 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.41 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.44 | MC |
| SRR4947496 | root | control | 3.66 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.98 | MC |
| SRR1633182 | panicle | WT | 0.27 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.80 | MC |
| SRR5126155 | root | "mock,7_days" | 4.07 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.12 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.57 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.42 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.04 | MC |
| SRR1213694 | root | wt | 1.15 | MC |
| SRR4947480 | root | control | 2.06 | MC |
| SRR4947481 | root | control | 3.50 | MC |
| SRR4947484 | root | Al | 2.64 | MC |
| SRR4947485 | root | Al | 2.09 | MC |
| SRR4947488 | root | control | 1.78 | MC |
| SRR4947489 | root | control | 3.00 | MC |
| SRR4947492 | root | Al | 2.99 | MC |
| SRR4947493 | root | Al | 1.99 | MC |
| SRR4947497 | root | control | 2.52 | MC |
| SRR4947500 | root | Al | 2.33 | MC |
| SRR4947501 | root | Al | 3.26 | MC |
| SRR4947504 | root | control | 2.74 | MC |
| SRR4947505 | root | control | 3.56 | MC |
| SRR4947508 | root | Al | 2.11 | MC |
| SRR4947509 | root | Al | 2.65 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.18 | MC |
| SRR6502104 | root | 100 mM NaCl | 4.74 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.29 | MC |
| SRR6502106 | root | control | 3.69 | MC |
| SRR6502107 | root | control | 2.51 | MC |
| SRR6502108 | root | control | 2.29 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.13 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.28 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.02 | MC |
| SRR1740433 | root_elongation_zone | wt | 3.39 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.37 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.33 | MC |
| SRR1740430 | root_meristematic_zone | wt | 3.28 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.94 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.72 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.78 | MC |
| SRR358791 | seedling | wt | 5.87 | MC |
| SRR358792 | seedling | wt | 6.02 | MC |
| SRR358793 | seedling | wt | 2.10 | MC |
| SRR358794 | seedling | wt | 1.51 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.86 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.50 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.91 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.07 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.22 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.75 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.27 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.33 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.60 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.01 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.02 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.66 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.22 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.79 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.12 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.81 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.99 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.37 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.28 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.72 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.92 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.61 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 9.37 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 5.00 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.22 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 9.16 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 4.16 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.03 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.90 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.99 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.15 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.73 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 5.63 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.43 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.13 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.60 | MC |