| SRR4457249 | 2nd_leaf | DAH4 | 2.90 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 2.69 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.63 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 2.89 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 3.04 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.67 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.83 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 4.28 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.95 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.97 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.75 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 2.34 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 2.07 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 3.36 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.59 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.54 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.47 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.87 | MC |
| SRR358795 | callus | wt | 8.42 | MC |
| SRR358796 | callus | wt | 8.96 | MC |
| SRR358797 | callus | wt | 7.20 | MC |
| SRR358798 | callus | wt | 8.72 | MC |
| SRR2338866 | endosprem | control | 3.69 | MC |
| SRR2338868 | endosprem | high_temperature | 1.61 | MC |
| SRR4457231 | flag_leaf | DAH4 | 2.01 | MC |
| SRR4457232 | flag_leaf | DAH4 | 2.12 | MC |
| SRR4457233 | flag_leaf | DAH4 | 2.64 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.31 | MC |
| SRR4457235 | flag_leaf | DAH12 | 2.43 | MC |
| SRR4457236 | flag_leaf | DAH12 | 2.05 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.56 | MC |
| SRR4457238 | flag_leaf | DAH20 | 2.25 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.07 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.16 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.30 | MC |
| SRR4457242 | flag_leaf | DAH28 | 1.30 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.23 | MC |
| SRR4457245 | flag_leaf | DAH36 | 2.48 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.34 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.74 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.63 | MC |
| SRR8240824 | leaf | wild_type | 2.01 | MC |
| SRR8240825 | leaf | wild_type | 1.95 | MC |
| SRR8240826 | leaf | wild_type | 0.63 | MC |
| SRR8240818 | leaf | wild_type | 1.46 | MC |
| SRR8240819 | leaf | wild_type | 1.72 | MC |
| SRR8240820 | leaf | wild_type | 1.43 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.64 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.68 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.07 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.27 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.25 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.78 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.00 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.58 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.21 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.65 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.16 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.34 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.45 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.41 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.22 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.20 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.27 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.48 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.91 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.03 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.79 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.97 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.00 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.84 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.67 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.97 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.00 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.84 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.67 | MC |
| SRR1761528 | leaf | drought | 2.97 | MC |
| SRR1761529 | leaf | drought | 4.00 | MC |
| SRR1761530 | leaf | control | 3.84 | MC |
| SRR1761531 | leaf | control | 4.67 | MC |
| SRR504365 | leaf | wt | 3.51 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.24 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.41 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.20 | MC |
| SRR6417967 | leaf | H2O_control | 2.03 | MC |
| SRR6417968 | leaf | H2O_control | 1.29 | MC |
| SRR6417969 | leaf | H2O_control | 2.11 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.56 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.34 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 3.52 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.14 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.96 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.69 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.27 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.42 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.72 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.70 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.75 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.30 | MC |
| SRR1213692 | leaf | wt | 4.26 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.28 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.70 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.77 | MC |
| SRR6502088 | leaf | control | 1.62 | MC |
| SRR6502089 | leaf | control | 1.86 | MC |
| SRR6502090 | leaf | control | 2.15 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.78 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.04 | MC |
| SRR6502100 | leaf | control | 1.72 | MC |
| SRR6502101 | leaf | control | 1.66 | MC |
| SRR6502102 | leaf | control | 2.06 | MC |
| SRR5856933 | leaf | control | 1.61 | MC |
| SRR5856934 | leaf | control | 1.00 | MC |
| SRR5856935 | leaf | control | 1.17 | MC |
| SRR5856936 | leaf | salt | 1.56 | MC |
| SRR5856937 | leaf | salt | 0.61 | MC |
| SRR5856938 | leaf | salt | 1.65 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.03 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.80 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 4.87 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.81 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.47 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 5.73 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 6.52 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.92 | MC |
| SRR6168979 | leaf | none (control) | 1.80 | MC |
| SRR6168980 | leaf | none (control) | 1.46 | MC |
| SRR8582888 | panicle | AM | 2.71 | MC |
| SRR8582890 | panicle | AM | 2.52 | MC |
| SRR8582891 | panicle | PM | 5.15 | MC |
| SRR8582892 | panicle | PM | 6.03 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.55 | MC |
| SRR1213694 | root | wt | 2.67 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.20 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.66 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.36 | MC |
| SRR6502094 | root | control | 3.04 | MC |
| SRR6502096 | root | control | 3.02 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.57 | MC |
| SRR6502106 | root | control | 4.18 | MC |
| SRR6502108 | root | control | 3.46 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.03 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.19 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.85 | MC |
| SRR1740428 | root_meristematic_zone | wt | 4.45 | MC |
| SRR6441554 | seedling | wild_type | 2.90 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.80 | MC |
| SRR1944583 | seedling | no_treatment | 1.78 | MC |
| SRR358791 | seedling | wt | 5.41 | MC |
| SRR358792 | seedling | wt | 4.21 | MC |
| SRR358793 | seedling | wt | 2.45 | MC |
| SRR358794 | seedling | wt | 3.24 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.43 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.38 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.14 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.01 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.22 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.45 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.65 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.05 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.75 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.37 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.37 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.76 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.91 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.21 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.79 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.25 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.96 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.48 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.86 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.51 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.92 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.73 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.54 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.99 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.57 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.28 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.25 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.61 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.14 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.06 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.88 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.77 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.52 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.57 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.70 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.95 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 6.51 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.17 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.31 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.78 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.61 | MC |