| SRR5560728 | caryopsis | wild_type | 2.36 | MC |
| SRR5560729 | caryopsis | wild_type | 4.11 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.37 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.05 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.58 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.47 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.89 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.60 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.49 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.62 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.92 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.69 | MC |
| SRR7265388 | embryo | 12hA | 3.46 | MC |
| SRR7265390 | embryo | 12hA | 3.54 | MC |
| SRR7265394 | embryo | 24hA | 3.36 | MC |
| SRR976168 | flag_leaf | wild_type | 2.97 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.22 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.85 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.42 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.63 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.73 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.03 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.97 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.42 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.95 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.08 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.79 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.14 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.18 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.49 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.39 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.32 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.30 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.57 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.95 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.58 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.29 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.11 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.97 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.74 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.28 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.90 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.70 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.71 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.11 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.25 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.43 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.46 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.33 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.33 | MC |
| SRR1761528 | leaf | drought | 2.33 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.19 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.64 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.21 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.77 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.58 | MC |
| SRR8611902 | leaf | Non-inoculated | 2.69 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.61 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.78 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.95 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.97 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.61 | MC |
| SRR6502088 | leaf | control | 1.99 | MC |
| SRR6502090 | leaf | control | 1.47 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.06 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.66 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.73 | MC |
| SRR6502101 | leaf | control | 2.32 | MC |
| SRR6502102 | leaf | control | 2.04 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.97 | MC |
| SRR6168974 | leaf | none (control) | 2.01 | MC |
| SRR6168975 | leaf | none (control) | 2.07 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.77 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.75 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.36 | MC |
| SRR6168979 | leaf | none (control) | 1.42 | MC |
| SRR6168981 | leaf | none (control) | 1.77 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.67 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.68 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.55 | MC |
| SRR8582889 | panicle | AM | 0.46 | MC |
| SRR8582890 | panicle | AM | 1.03 | MC |
| SRR8582891 | panicle | PM | 1.08 | MC |
| SRR8582892 | panicle | PM | 1.11 | MC |
| SRR8582893 | panicle | PM | 0.82 | MC |
| SRR5110429 | panicle | Dawn | 3.39 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.67 | MC |
| SRR5110438 | panicle | Dawn + 7h | 3.97 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.06 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.76 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 4.90 | MC |
| SRR5110446 | panicle | Dusk | 2.19 | MC |
| SRR5110447 | panicle | Dusk | 2.32 | MC |
| SRR5110448 | panicle | Dusk | 2.71 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.51 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.52 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.90 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.35 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.78 | MC |
| SRR1633182 | panicle | WT | 1.14 | MC |
| SRR1633185 | panicle | WT | 1.10 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.25 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.23 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.91 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.83 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.44 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.57 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.15 | MC |
| SRR3098741 | seedling | wt | 1.57 | MC |
| SRR3098743 | seedling | wt | 1.84 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.14 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.08 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.96 | MC |
| SRR1944583 | seedling | no_treatment | 3.92 | MC |
| SRR358793 | seedling | wt | 3.05 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.66 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.64 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.05 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.67 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.59 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.37 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.25 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.10 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.44 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.21 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.99 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.22 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.64 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.43 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 3.47 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 5.77 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.09 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.13 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 6.45 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 7.88 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 7.44 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.38 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 7.36 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 8.79 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.75 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.40 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.64 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.07 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.35 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.31 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.02 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.30 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.95 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.39 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.74 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.89 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.33 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.58 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.93 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.18 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.49 | MC |