| SRR5560727 | caryopsis | wild_type | 3.44 | MC |
| SRR5560729 | caryopsis | wild_type | 2.29 | MC |
| SRR7265412 | coleoptile | 4dA | 0.48 | MC |
| SRR7265414 | coleoptile | 4dA | 0.58 | MC |
| SRR2338866 | endosprem | control | 1.72 | MC |
| SRR2338867 | endosprem | control | 1.00 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.68 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.68 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.20 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.35 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.51 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.16 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.67 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.08 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.50 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.82 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.44 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.77 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.82 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.38 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.35 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.42 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.81 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.83 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.26 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.51 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.69 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.11 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.97 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 2.86 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.32 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.06 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.06 | MC |
| SRR1761528 | leaf | drought | 2.06 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.79 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.80 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.21 | MC |
| SRR6417967 | leaf | H2O_control | 0.56 | MC |
| SRR6417968 | leaf | H2O_control | 0.41 | MC |
| SRR6417969 | leaf | H2O_control | 1.47 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.19 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 1.80 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.38 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.86 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.28 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.99 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.25 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.79 | MC |
| SRR6168973 | leaf | none (control) | 3.63 | MC |
| SRR6168974 | leaf | none (control) | 0.32 | MC |
| SRR6168980 | leaf | none (control) | 0.26 | MC |
| SRR6168981 | leaf | none (control) | 0.65 | MC |
| SRR8582890 | panicle | AM | 0.64 | MC |
| SRR8582891 | panicle | PM | 1.01 | MC |
| SRR8582893 | panicle | PM | 0.39 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.08 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.52 | MC |
| SRR5126165 | root | "mock,14_days" | 0.61 | MC |
| SRR5126167 | root | "mock,14_days" | 1.17 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.35 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.35 | MC |
| SRR1213694 | root | wt | 1.62 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 3.70 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.05 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.62 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.48 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.28 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.59 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.07 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.03 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.91 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.25 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.10 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.44 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.62 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.38 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.29 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.61 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.35 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.34 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.94 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.64 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.52 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 1.67 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.42 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 0.78 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.73 | MC |