| SRR4457251 | 2nd_leaf | DAH4 | 0.81 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.43 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.80 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 1.03 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 2.53 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.40 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 2.25 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 2.38 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.34 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.55 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.38 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.43 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.99 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.70 | MC |
| SRR3745125 | anther | wt | 2.32 | MC |
| SRR3745126 | anther | wt | 1.32 | MC |
| SRR358795 | callus | wt | 2.66 | MC |
| SRR358796 | callus | wt | 3.56 | MC |
| SRR358797 | callus | wt | 2.52 | MC |
| SRR358798 | callus | wt | 4.68 | MC |
| SRR6320473 | carpel | wt | 6.58 | MC |
| SRR6320498 | carpel | wt | 3.86 | MC |
| SRR5560727 | caryopsis | wild_type | 2.89 | MC |
| SRR5560728 | caryopsis | wild_type | 3.45 | MC |
| SRR5560729 | caryopsis | wild_type | 4.87 | MC |
| SRR4947495 | root | control | 4.26 | MC |
| SRR7265404 | coleoptile | 2dN | 3.95 | MC |
| SRR7265409 | coleoptile | 3dN | 1.07 | MC |
| SRR7265410 | coleoptile | 3dN | 2.43 | MC |
| SRR7265411 | coleoptile | 3dN | 2.05 | MC |
| SRR7265412 | coleoptile | 4dA | 2.21 | MC |
| SRR7265413 | coleoptile | 4dA | 4.34 | MC |
| SRR7265414 | coleoptile | 4dA | 3.29 | MC |
| SRR7265415 | coleoptile | 4dN | 1.84 | MC |
| SRR7265416 | coleoptile | 4dN | 2.48 | MC |
| SRR7265417 | coleoptile | 4dN | 1.89 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.38 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.52 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.05 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.72 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 3.40 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.25 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.70 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.43 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.18 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.67 | MC |
| SRR7265376 | embryo | 1hA | 1.81 | MC |
| SRR7265378 | embryo | 1hA | 2.25 | MC |
| SRR7265379 | embryo | 1hN | 2.39 | MC |
| SRR7265380 | embryo | 1hN | 2.09 | MC |
| SRR7265381 | embryo | 1hN | 2.35 | MC |
| SRR7265382 | embryo | 3hA | 3.82 | MC |
| SRR7265383 | embryo | 3hA | 3.48 | MC |
| SRR7265384 | embryo | 3hA | 3.80 | MC |
| SRR7265385 | embryo | 3hN | 1.53 | MC |
| SRR7265386 | embryo | 3hN | 2.35 | MC |
| SRR7265387 | embryo | 3hN | 3.04 | MC |
| SRR2338867 | endosprem | control | 0.76 | MC |
| SRR2338868 | endosprem | high_temperature | 1.16 | MC |
| SRR2338869 | endosprem | high_temperature | 1.46 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.35 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.48 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.80 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.25 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.49 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.91 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.74 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.65 | MC |
| SRR4457239 | flag_leaf | DAH20 | 1.36 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.27 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.35 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.18 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.49 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.80 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.36 | MC |
| SRR4457248 | flag_leaf | DAH44 | 1.12 | MC |
| SRR8240825 | leaf | wild_type | 2.19 | MC |
| SRR8240826 | leaf | wild_type | 0.74 | MC |
| SRR8240818 | leaf | wild_type | 0.39 | MC |
| SRR8240819 | leaf | wild_type | 1.38 | MC |
| SRR8240820 | leaf | wild_type | 1.48 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.93 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.73 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.62 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.60 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.83 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.64 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.23 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.09 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.98 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.69 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.20 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.43 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.35 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.75 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.08 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.80 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.62 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.42 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.48 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.14 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.64 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.53 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.36 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.28 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.23 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.77 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.63 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.72 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 1.59 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 1.50 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 1.26 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.82 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.00 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.82 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.00 | MC |
| SRR1761528 | leaf | drought | 0.82 | MC |
| SRR1761531 | leaf | control | 1.00 | MC |
| SRR504365 | leaf | wt | 3.70 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.80 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.58 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.62 | MC |
| SRR6417967 | leaf | H2O_control | 1.85 | MC |
| SRR6417968 | leaf | H2O_control | 0.40 | MC |
| SRR6417969 | leaf | H2O_control | 0.45 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.69 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.55 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.97 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.98 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.83 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.74 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.27 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.51 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.73 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.55 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.45 | MC |
| SRR1213692 | leaf | wt | 4.19 | MC |
| SRR1213693 | leaf | wt | 2.99 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.95 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.21 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.66 | MC |
| SRR6502088 | leaf | control | 3.36 | MC |
| SRR6502089 | leaf | control | 3.14 | MC |
| SRR6502090 | leaf | control | 2.61 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.85 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.55 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 4.11 | MC |
| SRR6502101 | leaf | control | 3.80 | MC |
| SRR6502102 | leaf | control | 3.46 | MC |
| SRR5856927 | leaf | control | 1.55 | MC |
| SRR5856928 | leaf | control | 1.21 | MC |
| SRR5856929 | leaf | control | 1.99 | MC |
| SRR5856930 | leaf | salt | 1.29 | MC |
| SRR5856931 | leaf | salt | 1.18 | MC |
| SRR5856932 | leaf | salt | 1.78 | MC |
| SRR5856935 | leaf | control | 2.39 | MC |
| SRR5856936 | leaf | salt | 0.96 | MC |
| SRR5856937 | leaf | salt | 0.64 | MC |
| SRR5856938 | leaf | salt | 1.30 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.46 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.17 | MC |
| SRR6168975 | leaf | none (control) | 3.77 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.48 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.07 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.59 | MC |
| SRR6168979 | leaf | none (control) | 0.71 | MC |
| SRR6168980 | leaf | none (control) | 0.41 | MC |
| SRR6168981 | leaf | none (control) | 0.54 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.57 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.18 | MC |
| SRR8582888 | panicle | AM | 2.20 | MC |
| SRR8582889 | panicle | AM | 1.39 | MC |
| SRR8582890 | panicle | AM | 1.34 | MC |
| SRR8582891 | panicle | PM | 2.97 | MC |
| SRR8582892 | panicle | PM | 3.72 | MC |
| SRR8582893 | panicle | PM | 3.68 | MC |
| SRR5110430 | panicle | Dawn | 4.07 | MC |
| SRR4947496 | root | control | 2.72 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.52 | MC |
| SRR5110450 | panicle | Dawn + 14h | 4.16 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.70 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.26 | MC |
| SRR1633185 | panicle | WT | 1.06 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.95 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.89 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.09 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.66 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.36 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.04 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.66 | MC |
| SRR5126153 | root | "mock,7_days" | 3.14 | MC |
| SRR5126155 | root | "mock,7_days" | 3.73 | MC |
| SRR5126157 | root | "mock,7_days" | 2.13 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.89 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.64 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.16 | MC |
| SRR5126169 | root | "mock,14_days" | 3.69 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.80 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.45 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.68 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.73 | MC |
| SRR1213694 | root | wt | 2.85 | MC |
| SRR1213695 | root | wt | 2.03 | MC |
| SRR4947478 | root | control | 3.34 | MC |
| SRR4947480 | root | control | 3.71 | MC |
| SRR4947481 | root | control | 3.25 | MC |
| SRR4947484 | root | Al | 3.26 | MC |
| SRR4947485 | root | Al | 3.22 | MC |
| SRR4947487 | root | control | 2.10 | MC |
| SRR4947488 | root | control | 3.61 | MC |
| SRR4947489 | root | control | 2.59 | MC |
| SRR4947490 | root | Al | 3.03 | MC |
| SRR4947491 | root | Al | 5.41 | MC |
| SRR4947492 | root | Al | 3.13 | MC |
| SRR4947493 | root | Al | 2.20 | MC |
| SRR4947497 | root | control | 3.31 | MC |
| SRR4947499 | root | Al | 4.83 | MC |
| SRR4947500 | root | Al | 4.44 | MC |
| SRR4947502 | root | control | 5.20 | MC |
| SRR4947503 | root | control | 4.15 | MC |
| SRR4947504 | root | control | 2.84 | MC |
| SRR4947505 | root | control | 5.52 | MC |
| SRR4947506 | root | Al | 3.83 | MC |
| SRR4947508 | root | Al | 4.62 | MC |
| SRR4947509 | root | Al | 3.46 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.05 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.28 | MC |
| SRR6502093 | root | 100 mM NaCl | 3.28 | MC |
| SRR6502094 | root | control | 3.47 | MC |
| SRR6502096 | root | control | 2.97 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.44 | MC |
| SRR6502104 | root | 100 mM NaCl | 2.74 | MC |
| SRR6502106 | root | control | 4.40 | MC |
| SRR6502107 | root | control | 3.06 | MC |
| SRR6502108 | root | control | 4.61 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.65 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.40 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.04 | MC |
| SRR6441555 | seedling | wild_type | 2.86 | MC |
| SRR2154083 | seedling | wt | 3.28 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.54 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.51 | MC |
| SRR358791 | seedling | wt | 4.07 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.38 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.47 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.82 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.76 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.23 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.50 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.29 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.86 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.79 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.85 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.91 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.00 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.54 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.96 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.96 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.50 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.48 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.41 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 4.57 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.40 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 8.44 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 8.30 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 6.96 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 7.80 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 8.04 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 8.93 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 8.93 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.07 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.60 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.74 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.41 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.86 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.64 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 3.91 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.20 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.79 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.14 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.14 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.23 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.14 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.41 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.73 | MC |