| SRR358795 | callus | wt | 9.31 | MC |
| SRR4947495 | root | control | 1.37 | MC |
| SRR7265400 | coleoptile | 2dA | 1.03 | MC |
| SRR7265401 | coleoptile | 2dA | 1.18 | MC |
| SRR7265402 | coleoptile | 2dA | 0.94 | MC |
| SRR7265403 | coleoptile | 2dN | 1.37 | MC |
| SRR7265404 | coleoptile | 2dN | 1.30 | MC |
| SRR7265405 | coleoptile | 2dN | 1.43 | MC |
| SRR7265406 | coleoptile | 3dA | 2.18 | MC |
| SRR7265407 | coleoptile | 3dA | 2.24 | MC |
| SRR7265408 | coleoptile | 3dA | 1.32 | MC |
| SRR7265409 | coleoptile | 3dN | 1.59 | MC |
| SRR7265410 | coleoptile | 3dN | 1.06 | MC |
| SRR7265411 | coleoptile | 3dN | 1.56 | MC |
| SRR7265412 | coleoptile | 4dA | 2.01 | MC |
| SRR7265413 | coleoptile | 4dA | 2.71 | MC |
| SRR7265414 | coleoptile | 4dA | 2.31 | MC |
| SRR7265415 | coleoptile | 4dN | 1.47 | MC |
| SRR7265416 | coleoptile | 4dN | 2.30 | MC |
| SRR7265417 | coleoptile | 4dN | 1.33 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.02 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.69 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.91 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.22 | MC |
| SRR7265388 | embryo | 12hA | 1.18 | MC |
| SRR7265389 | embryo | 12hA | 1.48 | MC |
| SRR7265390 | embryo | 12hA | 1.30 | MC |
| SRR7265391 | embryo | 12hN | 1.75 | MC |
| SRR7265392 | embryo | 12hN | 1.68 | MC |
| SRR7265393 | embryo | 12hN | 2.07 | MC |
| SRR7265394 | embryo | 24hA | 1.16 | MC |
| SRR7265395 | embryo | 24hA | 1.03 | MC |
| SRR7265396 | embryo | 24hA | 1.01 | MC |
| SRR7265397 | embryo | 24hN | 1.47 | MC |
| SRR7265398 | embryo | 24hN | 1.46 | MC |
| SRR7265399 | embryo | 24hN | 1.30 | MC |
| SRR976168 | flag_leaf | wild_type | 1.73 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.76 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.26 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.54 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.59 | MC |
| SRR5856927 | leaf | control | 1.18 | MC |
| SRR5856928 | leaf | control | 1.60 | MC |
| SRR5856929 | leaf | control | 0.91 | MC |
| SRR5856930 | leaf | salt | 1.90 | MC |
| SRR5856932 | leaf | salt | 1.43 | MC |
| SRR5856933 | leaf | control | 1.64 | MC |
| SRR5856934 | leaf | control | 2.33 | MC |
| SRR5856935 | leaf | control | 2.21 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.80 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.64 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.98 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 5.65 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 5.90 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.57 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.78 | MC |
| SRR6168974 | leaf | none (control) | 4.31 | MC |
| SRR6168975 | leaf | none (control) | 3.62 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.24 | MC |
| SRR6168979 | leaf | none (control) | 0.38 | MC |
| SRR6168980 | leaf | none (control) | 0.42 | MC |
| SRR6168981 | leaf | none (control) | 1.33 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.43 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.24 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.20 | MC |
| SRR5110429 | panicle | Dawn | 4.54 | MC |
| SRR5110432 | panicle | Dawn | 3.40 | MC |
| SRR4947496 | root | control | 3.17 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.05 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.91 | MC |
| SRR5110446 | panicle | Dusk | 4.33 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.00 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.35 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.31 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.25 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.29 | MC |
| SRR5126149 | root | "mock,1_day" | 4.39 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.54 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.03 | MC |
| SRR4947478 | root | control | 1.25 | MC |
| SRR4947479 | root | control | 1.07 | MC |
| SRR4947480 | root | control | 3.33 | MC |
| SRR4947481 | root | control | 3.04 | MC |
| SRR4947482 | root | Al | 1.43 | MC |
| SRR4947483 | root | Al | 1.39 | MC |
| SRR4947484 | root | Al | 1.49 | MC |
| SRR4947485 | root | Al | 1.83 | MC |
| SRR4947487 | root | control | 1.49 | MC |
| SRR4947488 | root | control | 2.90 | MC |
| SRR4947489 | root | control | 2.41 | MC |
| SRR4947490 | root | Al | 1.93 | MC |
| SRR4947491 | root | Al | 2.50 | MC |
| SRR4947492 | root | Al | 2.59 | MC |
| SRR4947493 | root | Al | 2.17 | MC |
| SRR4947494 | root | control | 1.37 | MC |
| SRR4947497 | root | control | 3.50 | MC |
| SRR4947498 | root | Al | 3.12 | MC |
| SRR4947499 | root | Al | 1.55 | MC |
| SRR4947500 | root | Al | 3.21 | MC |
| SRR4947501 | root | Al | 2.85 | MC |
| SRR4947502 | root | control | 3.53 | MC |
| SRR4947503 | root | control | 2.17 | MC |
| SRR4947504 | root | control | 3.19 | MC |
| SRR4947505 | root | control | 3.21 | MC |
| SRR4947506 | root | Al | 1.73 | MC |
| SRR4947507 | root | Al | 1.97 | MC |
| SRR4947508 | root | Al | 2.85 | MC |
| SRR4947509 | root | Al | 2.47 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.75 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.32 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.82 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.29 | MC |
| SRR2154083 | seedling | wt | 3.28 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.21 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.71 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.35 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.44 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.90 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.29 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.14 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.85 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.04 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.86 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.89 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.20 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.13 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.22 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 7.45 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 7.12 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 8.82 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.20 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 3.68 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.35 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.20 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.88 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.58 | MC |