| SRR3745125 | anther | wt | 2.24 | MC |
| SRR3745126 | anther | wt | 1.50 | MC |
| SRR3745127 | anther | wt | 2.93 | MC |
| SRR358795 | callus | wt | 3.11 | MC |
| SRR358796 | callus | wt | 2.25 | MC |
| SRR358797 | callus | wt | 2.94 | MC |
| SRR358798 | callus | wt | 3.11 | MC |
| SRR5560729 | caryopsis | wild_type | 3.76 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.71 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.99 | MC |
| SRR7265400 | coleoptile | 2dA | 2.49 | MC |
| SRR7265401 | coleoptile | 2dA | 2.14 | MC |
| SRR7265402 | coleoptile | 2dA | 3.07 | MC |
| SRR7265408 | coleoptile | 3dA | 2.71 | MC |
| SRR7265412 | coleoptile | 4dA | 1.82 | MC |
| SRR7265413 | coleoptile | 4dA | 3.27 | MC |
| SRR7265414 | coleoptile | 4dA | 3.01 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.75 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.40 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.40 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.49 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.17 | MC |
| SRR7265396 | embryo | 24hA | 4.48 | MC |
| SRR2338867 | endosprem | control | 0.51 | MC |
| SRR2338869 | endosprem | high_temperature | 0.85 | MC |
| SRR976168 | flag_leaf | wild_type | 1.66 | MC |
| SRR1213691 | flower | wt | 3.67 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.21 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.77 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.54 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.89 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.76 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.30 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.13 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.61 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.46 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.99 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.81 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.09 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 3.46 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.15 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.65 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.87 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.78 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.47 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.64 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.98 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.27 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.98 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.51 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.34 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.34 | MC |
| SRR1761528 | leaf | drought | 4.34 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.89 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.12 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.46 | MC |
| SRR1213693 | leaf | wt | 3.71 | MC |
| SRR6168979 | leaf | none (control) | 1.02 | MC |
| SRR6168981 | leaf | none (control) | 0.33 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.27 | MC |
| SRR1633182 | panicle | WT | 1.66 | MC |
| SRR1633185 | panicle | WT | 1.69 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.75 | MC |
| SRR5126147 | root | "mock,1_day" | 3.23 | MC |
| SRR5126148 | root | "mock,1_day" | 3.08 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 4.77 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.45 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.21 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.38 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.93 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.56 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.19 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.59 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.54 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.91 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.31 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.10 | MC |
| SRR6441555 | seedling | wild_type | 3.04 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.79 | MC |
| SRR358791 | seedling | wt | 7.87 | MC |
| SRR358792 | seedling | wt | 7.01 | MC |
| SRR358793 | seedling | wt | 3.80 | MC |
| SRR358794 | seedling | wt | 4.82 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.64 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.17 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.13 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.79 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.39 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.20 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.99 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.96 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.10 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.81 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.94 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.48 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.80 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 10.75 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 10.11 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.82 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.57 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.83 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.83 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.20 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.93 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.24 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 4.19 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.22 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.09 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.33 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.76 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.45 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.38 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.78 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.86 | MC |