| SRR4457253 | 2nd_leaf | DAH12 | 3.67 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.87 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 4.01 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 3.05 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.46 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 4.84 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.15 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 3.17 | MC |
| SRR358795 | callus | wt | 1.71 | MC |
| SRR358796 | callus | wt | 1.45 | MC |
| SRR358797 | callus | wt | 3.03 | MC |
| SRR358798 | callus | wt | 3.13 | MC |
| SRR5560728 | caryopsis | wild_type | 4.52 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.72 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 1.20 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.08 | MC |
| SRR4947495 | root | control | 1.36 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.52 | MC |
| SRR7265400 | coleoptile | 2dA | 0.66 | MC |
| SRR7265401 | coleoptile | 2dA | 0.76 | MC |
| SRR7265402 | coleoptile | 2dA | 0.39 | MC |
| SRR7265406 | coleoptile | 3dA | 0.40 | MC |
| SRR7265407 | coleoptile | 3dA | 0.30 | MC |
| SRR7265412 | coleoptile | 4dA | 0.47 | MC |
| SRR7265413 | coleoptile | 4dA | 0.53 | MC |
| SRR7265414 | coleoptile | 4dA | 0.62 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.69 | MC |
| SRR7265373 | embryo | dry seed 0 h | 2.09 | MC |
| SRR7265374 | embryo | dry seed 0 h | 2.58 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.07 | MC |
| SRR7265376 | embryo | 1hA | 1.81 | MC |
| SRR7265377 | embryo | 1hA | 3.40 | MC |
| SRR7265378 | embryo | 1hA | 2.71 | MC |
| SRR7265379 | embryo | 1hN | 2.91 | MC |
| SRR7265380 | embryo | 1hN | 1.84 | MC |
| SRR7265381 | embryo | 1hN | 2.22 | MC |
| SRR7265382 | embryo | 3hA | 2.10 | MC |
| SRR7265383 | embryo | 3hA | 2.09 | MC |
| SRR7265384 | embryo | 3hA | 2.86 | MC |
| SRR7265385 | embryo | 3hN | 2.92 | MC |
| SRR7265386 | embryo | 3hN | 2.31 | MC |
| SRR7265387 | embryo | 3hN | 2.36 | MC |
| SRR7265388 | embryo | 12hA | 0.91 | MC |
| SRR7265390 | embryo | 12hA | 0.63 | MC |
| SRR7265391 | embryo | 12hN | 1.25 | MC |
| SRR7265392 | embryo | 12hN | 0.53 | MC |
| SRR7265393 | embryo | 12hN | 0.77 | MC |
| SRR7265396 | embryo | 24hA | 0.46 | MC |
| SRR7265399 | embryo | 24hN | 0.51 | MC |
| SRR2338866 | endosprem | control | 1.77 | MC |
| SRR2338867 | endosprem | control | 0.82 | MC |
| SRR2338868 | endosprem | high_temperature | 1.35 | MC |
| SRR2338869 | endosprem | high_temperature | 1.07 | MC |
| SRR976168 | flag_leaf | wild_type | 0.78 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.80 | MC |
| SRR4457242 | flag_leaf | DAH28 | 3.10 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.03 | MC |
| SRR4457246 | flag_leaf | DAH44 | 2.65 | MC |
| SRR4457247 | flag_leaf | DAH44 | 3.97 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.27 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 1.19 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.81 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 1.02 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 0.78 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.49 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.95 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.12 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.11 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.50 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.32 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.61 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.02 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.83 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.47 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.63 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.30 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 4.15 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.84 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 3.78 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.77 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.77 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.20 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.34 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.76 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.07 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.03 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.37 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.46 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.93 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.14 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.29 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.07 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.69 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.09 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.32 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 3.35 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.16 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.32 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 3.13 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 3.35 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.16 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.32 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 3.13 | MC |
| SRR1761528 | leaf | drought | 3.35 | MC |
| SRR1761529 | leaf | drought | 4.16 | MC |
| SRR1761530 | leaf | control | 2.32 | MC |
| SRR1761531 | leaf | control | 3.13 | MC |
| SRR504365 | leaf | wt | 1.98 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.04 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.17 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 2.62 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 2.61 | MC |
| SRR1213692 | leaf | wt | 3.58 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 3.39 | MC |
| SRR6502088 | leaf | control | 3.44 | MC |
| SRR6502089 | leaf | control | 3.68 | MC |
| SRR6502090 | leaf | control | 1.94 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.60 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.60 | MC |
| SRR6502100 | leaf | control | 3.06 | MC |
| SRR6502101 | leaf | control | 2.35 | MC |
| SRR6502102 | leaf | control | 1.76 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.90 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.38 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 4.02 | MC |
| SRR6168974 | leaf | none (control) | 3.11 | MC |
| SRR6168975 | leaf | none (control) | 4.57 | MC |
| SRR6168979 | leaf | none (control) | 1.90 | MC |
| SRR6168980 | leaf | none (control) | 0.57 | MC |
| SRR6168981 | leaf | none (control) | 0.98 | MC |
| SRR8582892 | panicle | PM | 5.34 | MC |
| SRR5110432 | panicle | Dawn | 2.16 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.81 | MC |
| SRR5110459 | panicle | Dawn + 21h | 1.85 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.73 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.22 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.02 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.31 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.47 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.96 | MC |
| SRR5126147 | root | "mock,1_day" | 3.77 | MC |
| SRR5126149 | root | "mock,1_day" | 4.25 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.96 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.65 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.23 | MC |
| SRR5126165 | root | "mock,14_days" | 2.56 | MC |
| SRR5126167 | root | "mock,14_days" | 2.65 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.09 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.12 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.72 | MC |
| SRR1213694 | root | wt | 1.19 | MC |
| SRR4947478 | root | control | 2.20 | MC |
| SRR4947479 | root | control | 1.63 | MC |
| SRR4947482 | root | Al | 1.47 | MC |
| SRR4947483 | root | Al | 1.12 | MC |
| SRR4947487 | root | control | 1.26 | MC |
| SRR4947490 | root | Al | 0.97 | MC |
| SRR4947491 | root | Al | 1.16 | MC |
| SRR4947494 | root | control | 1.56 | MC |
| SRR4947498 | root | Al | 1.15 | MC |
| SRR4947499 | root | Al | 1.83 | MC |
| SRR4947502 | root | control | 1.61 | MC |
| SRR4947503 | root | control | 0.95 | MC |
| SRR4947506 | root | Al | 1.56 | MC |
| SRR4947507 | root | Al | 0.80 | MC |
| SRR6502091 | root | 100 mM NaCl | 1.49 | MC |
| SRR6502092 | root | 100 mM NaCl | 2.42 | MC |
| SRR6502093 | root | 100 mM NaCl | 1.05 | MC |
| SRR6502094 | root | control | 1.88 | MC |
| SRR6502095 | root | control | 1.54 | MC |
| SRR6502096 | root | control | 2.78 | MC |
| SRR6502103 | root | 100 mM NaCl | 1.29 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.86 | MC |
| SRR6502105 | root | 100 mM NaCl | 1.44 | MC |
| SRR6502106 | root | control | 1.79 | MC |
| SRR6502107 | root | control | 0.84 | MC |
| SRR6502108 | root | control | 0.75 | MC |
| SRR1740432 | root_elongation_zone | wt | 3.31 | MC |
| SRR1740433 | root_elongation_zone | wt | 3.23 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.70 | MC |
| SRR1740430 | root_meristematic_zone | wt | 3.05 | MC |
| SRR2154083 | seedling | wt | 1.61 | MC |
| SRR2154084 | seedling | wt | 1.64 | MC |
| SRR2154085 | seedling | wt | 3.68 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.15 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.03 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.56 | MC |
| SRR358791 | seedling | wt | 1.95 | MC |
| SRR358792 | seedling | wt | 2.77 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.39 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.98 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.53 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.56 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.53 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.56 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 6.75 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 7.78 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.82 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.53 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 8.18 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 6.71 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 7.25 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 7.76 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.36 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.71 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.61 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 4.29 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.88 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.32 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.95 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 3.85 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 5.08 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 4.60 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.25 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.68 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.30 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 2.63 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.71 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.37 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.77 | MC |