| SRR4457252 | 2nd_leaf | DAH12 | 0.27 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.52 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.37 | MC |
| SRR358795 | callus | wt | 4.16 | MC |
| SRR358796 | callus | wt | 3.09 | MC |
| SRR358797 | callus | wt | 4.60 | MC |
| SRR358798 | callus | wt | 2.97 | MC |
| SRR7265388 | embryo | 12hA | 0.74 | MC |
| SRR7265389 | embryo | 12hA | 0.75 | MC |
| SRR7265390 | embryo | 12hA | 0.80 | MC |
| SRR7265397 | embryo | 24hN | 0.73 | MC |
| SRR7265398 | embryo | 24hN | 1.30 | MC |
| SRR7265399 | embryo | 24hN | 1.15 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.25 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.29 | MC |
| SRR8240818 | leaf | wild_type | 0.23 | MC |
| SRR8240819 | leaf | wild_type | 0.47 | MC |
| SRR8240820 | leaf | wild_type | 0.47 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.92 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.28 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.28 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 0.95 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.66 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.95 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.68 | MC |
| SRR1761528 | leaf | drought | 0.97 | MC |
| SRR1761529 | leaf | drought | 0.66 | MC |
| SRR504365 | leaf | wt | 0.33 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 1.00 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.65 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.92 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.95 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.61 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.73 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.46 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.54 | MC |
| SRR6502102 | leaf | control | 0.45 | MC |
| SRR5856930 | leaf | salt | 0.24 | MC |
| SRR5856931 | leaf | salt | 0.41 | MC |
| SRR5856932 | leaf | salt | 0.25 | MC |
| SRR5856936 | leaf | salt | 0.48 | MC |
| SRR5856937 | leaf | salt | 0.41 | MC |
| SRR5856938 | leaf | salt | 0.50 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.70 | MC |
| SRR6168979 | leaf | none (control) | 0.25 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.49 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.31 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.52 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.22 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.38 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.48 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.41 | MC |
| SRR5126147 | root | "mock,1_day" | 0.31 | MC |
| SRR5126148 | root | "mock,1_day" | 0.35 | MC |
| SRR5126149 | root | "mock,1_day" | 0.40 | MC |
| SRR5126155 | root | "mock,7_days" | 0.87 | MC |
| SRR5126157 | root | "mock,7_days" | 0.50 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.50 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126165 | root | "mock,14_days" | 0.53 | MC |
| SRR5126167 | root | "mock,14_days" | 1.67 | MC |
| SRR5126169 | root | "mock,14_days" | 0.40 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.04 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.86 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.46 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.63 | MC |
| SRR6502107 | root | control | 0.28 | MC |
| SRR6502108 | root | control | 0.37 | MC |
| SRR2154085 | seedling | wt | 0.35 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.35 | MC |
| SRR358791 | seedling | wt | 0.67 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.06 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.73 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.96 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.89 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.73 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.91 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.78 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.51 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.58 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.04 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.02 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.78 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.93 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.73 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.63 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 0.98 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.54 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.95 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 0.82 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.31 | MC |