| SRR4457249 | 2nd_leaf | DAH4 | 0.90 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.00 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.79 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.93 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.90 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.71 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.11 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.08 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.73 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.95 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.48 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.85 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.58 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.09 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.84 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.31 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.49 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 1.96 | MC |
| SRR3745125 | anther | wt | 0.67 | MC |
| SRR358796 | callus | wt | 9.48 | MC |
| SRR358797 | callus | wt | 7.72 | MC |
| SRR6320498 | carpel | wt | 1.14 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.59 | MC |
| SRR976168 | flag_leaf | wild_type | 0.47 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.76 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.69 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.02 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.93 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.49 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.49 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.50 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.71 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.62 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.61 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.76 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.81 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.81 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.44 | MC |
| SRR4457246 | flag_leaf | DAH44 | 1.36 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.08 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.48 | MC |
| SRR8060835 | leaf | wild_type | 2.13 | MC |
| SRR8060837 | leaf | wild_type | 2.38 | MC |
| SRR8240824 | leaf | wild_type | 2.26 | MC |
| SRR8240825 | leaf | wild_type | 2.12 | MC |
| SRR8240826 | leaf | wild_type | 1.48 | MC |
| SRR8240818 | leaf | wild_type | 0.92 | MC |
| SRR8240819 | leaf | wild_type | 0.54 | MC |
| SRR8240820 | leaf | wild_type | 1.29 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 2.62 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.84 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.86 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.04 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.28 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.38 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.55 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.16 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.66 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.39 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.21 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 2.36 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.53 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.60 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 2.87 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 2.33 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.32 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.00 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.86 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.03 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.24 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 3.79 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.41 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.65 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.20 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.81 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.40 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.28 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.56 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.91 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.68 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.61 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.25 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.56 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 3.34 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.45 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.89 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.72 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.34 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 4.01 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.89 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.72 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.34 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 4.01 | MC |
| SRR1761528 | leaf | drought | 1.89 | MC |
| SRR1761529 | leaf | drought | 2.72 | MC |
| SRR1761530 | leaf | control | 3.34 | MC |
| SRR1761531 | leaf | control | 4.01 | MC |
| SRR504365 | leaf | wt | 2.30 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.67 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.29 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.19 | MC |
| SRR6417967 | leaf | H2O_control | 2.25 | MC |
| SRR6417968 | leaf | H2O_control | 2.18 | MC |
| SRR6417969 | leaf | H2O_control | 1.46 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.15 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.17 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.67 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.78 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.92 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.47 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.13 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.06 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.23 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.77 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.87 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.71 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.35 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.91 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 3.28 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.89 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.45 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.33 | MC |
| SRR6502088 | leaf | control | 2.84 | MC |
| SRR6502089 | leaf | control | 1.53 | MC |
| SRR6502090 | leaf | control | 1.61 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.45 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.75 | MC |
| SRR6502100 | leaf | control | 2.70 | MC |
| SRR6502101 | leaf | control | 2.08 | MC |
| SRR6502102 | leaf | control | 3.62 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.61 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.00 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.19 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.19 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.44 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.23 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.82 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.23 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.79 | MC |
| SRR6168979 | leaf | none (control) | 0.33 | MC |
| SRR6168980 | leaf | none (control) | 1.10 | MC |
| SRR6168981 | leaf | none (control) | 1.82 | MC |
| SRR8582888 | panicle | AM | 1.31 | MC |
| SRR8582889 | panicle | AM | 1.20 | MC |
| SRR8582890 | panicle | AM | 2.04 | MC |
| SRR8582891 | panicle | PM | 3.32 | MC |
| SRR8582892 | panicle | PM | 2.79 | MC |
| SRR8582893 | panicle | PM | 2.53 | MC |
| SRR5110429 | panicle | Dawn | 3.31 | MC |
| SRR5110430 | panicle | Dawn | 2.64 | MC |
| SRR5110431 | panicle | Dawn | 2.53 | MC |
| SRR5110432 | panicle | Dawn | 2.82 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.54 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.44 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.54 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.41 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.29 | MC |
| SRR5110438 | panicle | Dawn + 7h | 4.11 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.31 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.85 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.00 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.01 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.71 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.82 | MC |
| SRR5110445 | panicle | Dusk | 1.64 | MC |
| SRR5110446 | panicle | Dusk | 3.51 | MC |
| SRR5110448 | panicle | Dusk | 4.61 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.60 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.01 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.76 | MC |
| SRR5110452 | panicle | Dawn + 14h | 3.37 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.75 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.55 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 2.60 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.66 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.09 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.63 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.47 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.87 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.09 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.81 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.83 | MC |
| SRR5126165 | root | "mock,14_days" | 4.52 | MC |
| SRR5126167 | root | "mock,14_days" | 3.58 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.87 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.75 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.23 | MC |
| SRR1213694 | root | wt | 3.02 | MC |
| SRR4947482 | root | Al | 3.36 | MC |
| SRR2154083 | seedling | wt | 3.44 | MC |
| SRR3098741 | seedling | wt | 2.12 | MC |
| SRR3098742 | seedling | wt | 2.27 | MC |
| SRR3098743 | seedling | wt | 2.00 | MC |
| SRR358791 | seedling | wt | 4.33 | MC |
| SRR358792 | seedling | wt | 3.21 | MC |
| SRR358793 | seedling | wt | 4.64 | MC |
| SRR358794 | seedling | wt | 5.64 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.59 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.03 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.70 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.73 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.32 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.16 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.98 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.28 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.16 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 4.23 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.89 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.99 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.77 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.84 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 3.28 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.80 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.58 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.43 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.27 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.26 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.65 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.21 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.00 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.43 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.94 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 2.72 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.39 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.47 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.29 | MC |