| SRR4457249 | 2nd_leaf | DAH4 | 5.33 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 3.67 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 3.84 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.52 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.99 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 2.79 | MC |
| SRR3745125 | anther | wt | 6.02 | MC |
| SRR3745126 | anther | wt | 4.04 | MC |
| SRR3745127 | anther | wt | 3.67 | MC |
| SRR358795 | callus | wt | 3.53 | MC |
| SRR358796 | callus | wt | 2.81 | MC |
| SRR358797 | callus | wt | 3.73 | MC |
| SRR358798 | callus | wt | 3.87 | MC |
| SRR4947495 | root | control | 0.81 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.82 | MC |
| SRR7265400 | coleoptile | 2dA | 2.50 | MC |
| SRR7265401 | coleoptile | 2dA | 2.15 | MC |
| SRR7265402 | coleoptile | 2dA | 2.17 | MC |
| SRR7265404 | coleoptile | 2dN | 3.64 | MC |
| SRR7265406 | coleoptile | 3dA | 2.32 | MC |
| SRR7265407 | coleoptile | 3dA | 2.70 | MC |
| SRR7265408 | coleoptile | 3dA | 1.38 | MC |
| SRR7265412 | coleoptile | 4dA | 1.71 | MC |
| SRR7265413 | coleoptile | 4dA | 3.93 | MC |
| SRR7265414 | coleoptile | 4dA | 2.56 | MC |
| SRR7265415 | coleoptile | 4dN | 4.80 | MC |
| SRR7265416 | coleoptile | 4dN | 4.27 | MC |
| SRR7265417 | coleoptile | 4dN | 3.90 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.69 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.46 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.57 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.84 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.33 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.76 | MC |
| SRR7265376 | embryo | 1hA | 1.93 | MC |
| SRR7265377 | embryo | 1hA | 1.70 | MC |
| SRR7265378 | embryo | 1hA | 2.06 | MC |
| SRR7265379 | embryo | 1hN | 2.25 | MC |
| SRR7265380 | embryo | 1hN | 2.60 | MC |
| SRR7265381 | embryo | 1hN | 2.50 | MC |
| SRR7265382 | embryo | 3hA | 3.26 | MC |
| SRR7265383 | embryo | 3hA | 3.35 | MC |
| SRR7265384 | embryo | 3hA | 3.17 | MC |
| SRR7265385 | embryo | 3hN | 1.98 | MC |
| SRR7265386 | embryo | 3hN | 1.47 | MC |
| SRR7265387 | embryo | 3hN | 1.72 | MC |
| SRR7265388 | embryo | 12hA | 2.43 | MC |
| SRR7265389 | embryo | 12hA | 2.31 | MC |
| SRR7265390 | embryo | 12hA | 2.82 | MC |
| SRR7265391 | embryo | 12hN | 2.40 | MC |
| SRR7265392 | embryo | 12hN | 2.75 | MC |
| SRR7265393 | embryo | 12hN | 2.21 | MC |
| SRR7265394 | embryo | 24hA | 3.07 | MC |
| SRR7265395 | embryo | 24hA | 2.35 | MC |
| SRR7265396 | embryo | 24hA | 1.71 | MC |
| SRR7265397 | embryo | 24hN | 3.09 | MC |
| SRR7265398 | embryo | 24hN | 2.45 | MC |
| SRR7265399 | embryo | 24hN | 2.58 | MC |
| SRR2338866 | endosprem | control | 3.75 | MC |
| SRR976168 | flag_leaf | wild_type | 0.52 | MC |
| SRR4457240 | flag_leaf | DAH28 | 3.01 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.90 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.79 | MC |
| SRR4457246 | flag_leaf | DAH44 | 3.84 | MC |
| SRR4457247 | flag_leaf | DAH44 | 2.73 | MC |
| SRR4457248 | flag_leaf | DAH44 | 2.58 | MC |
| SRR8060835 | leaf | wild_type | 2.56 | MC |
| SRR8060837 | leaf | wild_type | 2.72 | MC |
| SRR8240824 | leaf | wild_type | 0.61 | MC |
| SRR8240825 | leaf | wild_type | 0.76 | MC |
| SRR8240826 | leaf | wild_type | 0.99 | MC |
| SRR8240818 | leaf | wild_type | 1.75 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.22 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.28 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.33 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.36 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.76 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 3.71 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.53 | MC |
| SRR5856927 | leaf | control | 0.67 | MC |
| SRR5856928 | leaf | control | 0.70 | MC |
| SRR5856929 | leaf | control | 1.33 | MC |
| SRR5856930 | leaf | salt | 0.57 | MC |
| SRR5856931 | leaf | salt | 0.70 | MC |
| SRR5856932 | leaf | salt | 0.46 | MC |
| SRR5856933 | leaf | control | 1.32 | MC |
| SRR5856934 | leaf | control | 0.80 | MC |
| SRR5856935 | leaf | control | 1.32 | MC |
| SRR5856936 | leaf | salt | 0.71 | MC |
| SRR5856937 | leaf | salt | 0.55 | MC |
| SRR5856938 | leaf | salt | 0.48 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.49 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.78 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.22 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 1.64 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.68 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.94 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.31 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 2.79 | MC |
| SRR6168973 | leaf | none (control) | 3.40 | MC |
| SRR6168974 | leaf | none (control) | 3.95 | MC |
| SRR6168975 | leaf | none (control) | 2.67 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.90 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.83 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.82 | MC |
| SRR6168980 | leaf | none (control) | 1.09 | MC |
| SRR6168981 | leaf | none (control) | 2.21 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.35 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.38 | MC |
| SRR8582891 | panicle | PM | 4.62 | MC |
| SRR8582892 | panicle | PM | 4.61 | MC |
| SRR8582893 | panicle | PM | 3.73 | MC |
| SRR4947496 | root | control | 3.17 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.72 | MC |
| SRR5110439 | panicle | Dawn + 7h | 4.51 | MC |
| SRR5110446 | panicle | Dusk | 4.35 | MC |
| SRR5110447 | panicle | Dusk | 3.85 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.59 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.51 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.58 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.84 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.12 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.95 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.44 | MC |
| SRR4947478 | root | control | 1.23 | MC |
| SRR4947479 | root | control | 0.93 | MC |
| SRR4947480 | root | control | 3.30 | MC |
| SRR4947481 | root | control | 4.49 | MC |
| SRR4947482 | root | Al | 1.01 | MC |
| SRR4947483 | root | Al | 1.04 | MC |
| SRR4947484 | root | Al | 2.17 | MC |
| SRR4947485 | root | Al | 2.57 | MC |
| SRR4947487 | root | control | 0.73 | MC |
| SRR4947488 | root | control | 4.03 | MC |
| SRR4947489 | root | control | 1.67 | MC |
| SRR4947490 | root | Al | 1.10 | MC |
| SRR4947491 | root | Al | 0.83 | MC |
| SRR4947492 | root | Al | 2.24 | MC |
| SRR4947493 | root | Al | 1.38 | MC |
| SRR4947494 | root | control | 1.02 | MC |
| SRR4947497 | root | control | 3.33 | MC |
| SRR4947498 | root | Al | 1.19 | MC |
| SRR4947499 | root | Al | 0.90 | MC |
| SRR4947500 | root | Al | 4.01 | MC |
| SRR4947501 | root | Al | 2.96 | MC |
| SRR4947502 | root | control | 1.85 | MC |
| SRR4947503 | root | control | 1.65 | MC |
| SRR4947504 | root | control | 2.83 | MC |
| SRR4947505 | root | control | 3.22 | MC |
| SRR4947506 | root | Al | 1.24 | MC |
| SRR4947507 | root | Al | 1.16 | MC |
| SRR4947508 | root | Al | 2.41 | MC |
| SRR4947509 | root | Al | 2.53 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.35 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.62 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.35 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.50 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.27 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.07 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.93 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.11 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.11 | MC |
| SRR1944583 | seedling | no_treatment | 3.48 | MC |
| SRR358791 | seedling | wt | 2.53 | MC |
| SRR358792 | seedling | wt | 3.27 | MC |
| SRR358793 | seedling | wt | 1.74 | MC |
| SRR358794 | seedling | wt | 1.36 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.08 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.84 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.80 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.68 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.60 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.82 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.99 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.76 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.94 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.10 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.80 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.59 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.98 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.17 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.43 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.44 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 5.88 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 3.09 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 5.82 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.42 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 4.40 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 5.55 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 4.88 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.19 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.31 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.27 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.85 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 7.90 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 4.59 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.05 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.27 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 6.12 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 8.63 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 6.33 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 5.64 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.12 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.87 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.02 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.86 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.02 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.11 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.12 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.19 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.74 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.06 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.19 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 4.97 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.44 | MC |