| SRR4457262 | 2nd_leaf | DAH36 | 0.68 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.55 | MC |
| SRR3745125 | anther | wt | 0.74 | MC |
| SRR3745127 | anther | wt | 1.10 | MC |
| SRR358795 | callus | wt | 2.50 | MC |
| SRR358796 | callus | wt | 1.28 | MC |
| SRR358797 | callus | wt | 2.31 | MC |
| SRR358798 | callus | wt | 2.62 | MC |
| SRR6320473 | carpel | wt | 2.66 | MC |
| SRR6320498 | carpel | wt | 1.70 | MC |
| SRR5560727 | caryopsis | wild_type | 1.71 | MC |
| SRR5560728 | caryopsis | wild_type | 1.19 | MC |
| SRR5560729 | caryopsis | wild_type | 0.84 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.67 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.44 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 0.37 | MC |
| SRR2338867 | endosprem | control | 0.82 | MC |
| SRR2338869 | endosprem | high_temperature | 1.98 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.28 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.43 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.85 | MC |
| SRR1213691 | flower | wt | 0.89 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 0.68 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.52 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.26 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.40 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.41 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.01 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.35 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.30 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.70 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.43 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.19 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.56 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.63 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.43 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.29 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.67 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.49 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.25 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.28 | MC |
| SRR5110429 | panicle | Dawn | 1.15 | MC |
| SRR5110430 | panicle | Dawn | 0.74 | MC |
| SRR5110431 | panicle | Dawn | 0.72 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.58 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.57 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.61 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.83 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.67 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.82 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.11 | MC |
| SRR5110445 | panicle | Dusk | 0.91 | MC |
| SRR5110446 | panicle | Dusk | 1.23 | MC |
| SRR5110447 | panicle | Dusk | 1.24 | MC |
| SRR5110448 | panicle | Dusk | 2.31 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.72 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.50 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.37 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.40 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.98 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.13 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.94 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.40 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.87 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.70 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.16 | MC |
| SRR1633185 | panicle | WT | 0.58 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.35 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.40 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 0.46 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 0.57 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 2.13 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.12 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.43 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.47 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.39 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.43 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 0.44 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.46 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 0.75 | MC |
| SRR4947497 | root | control | 1.02 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.79 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.71 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.32 | MC |
| SRR6502106 | root | control | 0.47 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.18 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.74 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.22 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.77 | MC |
| SRR2154084 | seedling | wt | 0.35 | MC |
| SRR3098741 | seedling | wt | 0.91 | MC |
| SRR3098742 | seedling | wt | 0.87 | MC |
| SRR3098743 | seedling | wt | 1.56 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.66 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.02 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.06 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 2.81 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.28 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.43 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.48 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.17 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.37 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.62 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.36 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.30 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 2.54 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 2.62 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 2.05 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 1.40 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 3.57 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.62 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 3.08 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.45 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.70 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.39 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.43 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.03 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 1.96 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 2.54 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.81 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.05 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.74 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.89 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.10 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 2.70 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 1.83 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 1.62 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 2.65 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.32 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.04 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.20 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.69 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.30 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.23 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.07 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.66 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.14 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.81 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.63 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.47 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.41 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.56 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.35 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.64 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.46 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.36 | MC |