| SRR4457259 | 2nd_leaf | DAH28 | 4.24 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 5.06 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 5.64 | MC |
| SRR358795 | callus | wt | 4.19 | MC |
| SRR358796 | callus | wt | 5.69 | MC |
| SRR358797 | callus | wt | 4.01 | MC |
| SRR358798 | callus | wt | 4.02 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.94 | MC |
| SRR4947495 | root | control | 2.99 | MC |
| SRR7265400 | coleoptile | 2dA | 1.67 | MC |
| SRR7265401 | coleoptile | 2dA | 1.69 | MC |
| SRR7265402 | coleoptile | 2dA | 1.70 | MC |
| SRR7265403 | coleoptile | 2dN | 1.85 | MC |
| SRR7265404 | coleoptile | 2dN | 1.59 | MC |
| SRR7265405 | coleoptile | 2dN | 1.61 | MC |
| SRR7265406 | coleoptile | 3dA | 1.45 | MC |
| SRR7265407 | coleoptile | 3dA | 1.34 | MC |
| SRR7265408 | coleoptile | 3dA | 1.16 | MC |
| SRR7265409 | coleoptile | 3dN | 2.15 | MC |
| SRR7265410 | coleoptile | 3dN | 2.07 | MC |
| SRR7265411 | coleoptile | 3dN | 1.98 | MC |
| SRR7265412 | coleoptile | 4dA | 1.45 | MC |
| SRR7265413 | coleoptile | 4dA | 2.83 | MC |
| SRR7265414 | coleoptile | 4dA | 2.13 | MC |
| SRR7265415 | coleoptile | 4dN | 2.29 | MC |
| SRR7265416 | coleoptile | 4dN | 1.89 | MC |
| SRR7265417 | coleoptile | 4dN | 2.21 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.86 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.08 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 1.83 | MC |
| SRR7265374 | embryo | dry seed 0 h | 3.59 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.39 | MC |
| SRR7265376 | embryo | 1hA | 2.64 | MC |
| SRR7265377 | embryo | 1hA | 2.84 | MC |
| SRR7265378 | embryo | 1hA | 2.81 | MC |
| SRR7265379 | embryo | 1hN | 3.26 | MC |
| SRR7265380 | embryo | 1hN | 3.00 | MC |
| SRR7265382 | embryo | 3hA | 1.73 | MC |
| SRR7265383 | embryo | 3hA | 1.59 | MC |
| SRR7265384 | embryo | 3hA | 1.62 | MC |
| SRR7265385 | embryo | 3hN | 2.19 | MC |
| SRR7265386 | embryo | 3hN | 2.24 | MC |
| SRR7265387 | embryo | 3hN | 2.64 | MC |
| SRR7265388 | embryo | 12hA | 1.85 | MC |
| SRR7265389 | embryo | 12hA | 2.14 | MC |
| SRR7265390 | embryo | 12hA | 2.08 | MC |
| SRR7265391 | embryo | 12hN | 2.09 | MC |
| SRR7265392 | embryo | 12hN | 2.22 | MC |
| SRR7265393 | embryo | 12hN | 2.09 | MC |
| SRR7265394 | embryo | 24hA | 2.25 | MC |
| SRR7265395 | embryo | 24hA | 2.02 | MC |
| SRR7265396 | embryo | 24hA | 2.37 | MC |
| SRR7265397 | embryo | 24hN | 1.62 | MC |
| SRR7265398 | embryo | 24hN | 1.95 | MC |
| SRR7265399 | embryo | 24hN | 1.89 | MC |
| SRR2338866 | endosprem | control | 2.46 | MC |
| SRR2338867 | endosprem | control | 1.54 | MC |
| SRR2338868 | endosprem | high_temperature | 1.97 | MC |
| SRR2338869 | endosprem | high_temperature | 1.88 | MC |
| SRR976168 | flag_leaf | wild_type | 1.94 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.31 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.46 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.96 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.61 | MC |
| SRR4457242 | flag_leaf | DAH28 | 2.60 | MC |
| SRR4457247 | flag_leaf | DAH44 | 5.00 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.40 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 6.21 | MC |
| SRR4947496 | root | control | 2.51 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 2.00 | MC |
| SRR1633182 | panicle | WT | 3.93 | MC |
| SRR1633185 | panicle | WT | 5.71 | MC |
| SRR5126147 | root | "mock,1_day" | 3.98 | MC |
| SRR5126148 | root | "mock,1_day" | 3.05 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.18 | MC |
| SRR5126153 | root | "mock,7_days" | 3.31 | MC |
| SRR5126155 | root | "mock,7_days" | 3.97 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.30 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.19 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.80 | MC |
| SRR5126165 | root | "mock,14_days" | 3.77 | MC |
| SRR5126167 | root | "mock,14_days" | 3.76 | MC |
| SRR5126169 | root | "mock,14_days" | 4.07 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.68 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 4.62 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.57 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.43 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.95 | MC |
| SRR1213694 | root | wt | 2.72 | MC |
| SRR4947478 | root | control | 2.32 | MC |
| SRR4947479 | root | control | 2.28 | MC |
| SRR4947480 | root | control | 2.30 | MC |
| SRR4947481 | root | control | 2.70 | MC |
| SRR4947482 | root | Al | 2.35 | MC |
| SRR4947483 | root | Al | 2.50 | MC |
| SRR4947484 | root | Al | 2.06 | MC |
| SRR4947485 | root | Al | 2.50 | MC |
| SRR4947487 | root | control | 2.42 | MC |
| SRR4947488 | root | control | 2.74 | MC |
| SRR4947489 | root | control | 2.11 | MC |
| SRR4947490 | root | Al | 2.45 | MC |
| SRR4947491 | root | Al | 3.18 | MC |
| SRR4947492 | root | Al | 1.98 | MC |
| SRR4947493 | root | Al | 2.62 | MC |
| SRR4947494 | root | control | 2.36 | MC |
| SRR4947497 | root | control | 2.72 | MC |
| SRR4947498 | root | Al | 3.72 | MC |
| SRR4947499 | root | Al | 3.01 | MC |
| SRR4947500 | root | Al | 2.20 | MC |
| SRR4947501 | root | Al | 3.77 | MC |
| SRR4947502 | root | control | 3.81 | MC |
| SRR4947503 | root | control | 3.05 | MC |
| SRR4947504 | root | control | 2.63 | MC |
| SRR4947505 | root | control | 2.89 | MC |
| SRR4947506 | root | Al | 2.44 | MC |
| SRR4947507 | root | Al | 3.25 | MC |
| SRR4947508 | root | Al | 2.58 | MC |
| SRR4947509 | root | Al | 1.99 | MC |
| SRR6502094 | root | control | 3.85 | MC |
| SRR6502095 | root | control | 3.84 | MC |
| SRR6502096 | root | control | 3.04 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.74 | MC |
| SRR6502106 | root | control | 3.38 | MC |
| SRR6502107 | root | control | 2.95 | MC |
| SRR6502108 | root | control | 2.97 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.01 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.03 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.04 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.04 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.31 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.14 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.45 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.80 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.97 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.37 | MC |
| SRR358791 | seedling | wt | 4.72 | MC |
| SRR358792 | seedling | wt | 4.14 | MC |
| SRR358793 | seedling | wt | 2.23 | MC |
| SRR358794 | seedling | wt | 2.22 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.26 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.70 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.39 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.15 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.70 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.08 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.04 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.72 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.54 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.63 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.95 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.57 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 6.57 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 7.08 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 6.99 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 7.44 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 7.51 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 6.74 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 6.66 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 7.19 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 6.68 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 4.99 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.63 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 5.50 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 6.06 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 6.21 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.70 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 6.50 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 7.49 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 5.99 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 6.74 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.64 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 6.23 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 7.66 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.67 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 4.31 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.58 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.53 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.33 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.86 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.99 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.46 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.74 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.22 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.92 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.64 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.33 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.79 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.14 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 2.43 | MC |