| SRR4457251 | 2nd_leaf | DAH4 | 0.27 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.40 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.32 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.41 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.24 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.40 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.57 | MC |
| SRR3745127 | anther | wt | 2.13 | MC |
| SRR5560727 | caryopsis | wild_type | 1.95 | MC |
| SRR5560728 | caryopsis | wild_type | 1.23 | MC |
| SRR5560729 | caryopsis | wild_type | 0.76 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.36 | MC |
| SRR7265400 | coleoptile | 2dA | 0.43 | MC |
| SRR7265401 | coleoptile | 2dA | 0.43 | MC |
| SRR7265402 | coleoptile | 2dA | 0.45 | MC |
| SRR7265403 | coleoptile | 2dN | 0.80 | MC |
| SRR7265404 | coleoptile | 2dN | 1.10 | MC |
| SRR7265405 | coleoptile | 2dN | 0.75 | MC |
| SRR7265409 | coleoptile | 3dN | 0.40 | MC |
| SRR7265411 | coleoptile | 3dN | 0.57 | MC |
| SRR7265412 | coleoptile | 4dA | 0.44 | MC |
| SRR7265416 | coleoptile | 4dN | 0.94 | MC |
| SRR7265417 | coleoptile | 4dN | 0.55 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.38 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.78 | MC |
| SRR7265374 | embryo | dry seed 0 h | 0.47 | MC |
| SRR7265376 | embryo | 1hA | 0.42 | MC |
| SRR7265377 | embryo | 1hA | 0.68 | MC |
| SRR7265378 | embryo | 1hA | 1.03 | MC |
| SRR7265379 | embryo | 1hN | 0.78 | MC |
| SRR7265381 | embryo | 1hN | 0.58 | MC |
| SRR7265382 | embryo | 3hA | 1.03 | MC |
| SRR7265383 | embryo | 3hA | 1.33 | MC |
| SRR7265384 | embryo | 3hA | 0.87 | MC |
| SRR7265385 | embryo | 3hN | 1.26 | MC |
| SRR7265386 | embryo | 3hN | 0.51 | MC |
| SRR7265387 | embryo | 3hN | 0.70 | MC |
| SRR7265388 | embryo | 12hA | 0.97 | MC |
| SRR7265389 | embryo | 12hA | 2.37 | MC |
| SRR7265390 | embryo | 12hA | 1.29 | MC |
| SRR7265391 | embryo | 12hN | 1.54 | MC |
| SRR7265392 | embryo | 12hN | 1.39 | MC |
| SRR7265393 | embryo | 12hN | 1.33 | MC |
| SRR7265395 | embryo | 24hA | 1.82 | MC |
| SRR7265396 | embryo | 24hA | 0.64 | MC |
| SRR7265397 | embryo | 24hN | 0.84 | MC |
| SRR7265398 | embryo | 24hN | 1.48 | MC |
| SRR7265399 | embryo | 24hN | 1.14 | MC |
| SRR2338868 | endosprem | high_temperature | 0.42 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.22 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.47 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.29 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.71 | MC |
| SRR1213691 | flower | wt | 1.71 | MC |
| SRR8060835 | leaf | wild_type | 0.23 | MC |
| SRR8060836 | leaf | wild_type | 0.22 | MC |
| SRR8240819 | leaf | wild_type | 0.25 | MC |
| SRR8240820 | leaf | wild_type | 0.26 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.50 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.24 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.35 | MC |
| SRR504365 | leaf | wt | 0.90 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.43 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.32 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.38 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.79 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.35 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.57 | MC |
| SRR1213692 | leaf | wt | 0.34 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.45 | MC |
| SRR6502102 | leaf | control | 0.41 | MC |
| SRR5856929 | leaf | control | 0.18 | MC |
| SRR5856931 | leaf | salt | 0.16 | MC |
| SRR5856933 | leaf | control | 0.31 | MC |
| SRR5856934 | leaf | control | 0.47 | MC |
| SRR5856935 | leaf | control | 0.23 | MC |
| SRR5856937 | leaf | salt | 0.14 | MC |
| SRR6168973 | leaf | none (control) | 0.63 | MC |
| SRR6168974 | leaf | none (control) | 0.81 | MC |
| SRR6168975 | leaf | none (control) | 0.42 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.39 | MC |
| SRR6168979 | leaf | none (control) | 0.48 | MC |
| SRR8582891 | panicle | PM | 0.46 | MC |
| SRR8582892 | panicle | PM | 0.74 | MC |
| SRR8582893 | panicle | PM | 0.74 | MC |
| SRR4947496 | root | control | 0.50 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.79 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.88 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.58 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.30 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.74 | MC |
| SRR5126147 | root | "mock,1_day" | 0.73 | MC |
| SRR5126148 | root | "mock,1_day" | 0.55 | MC |
| SRR5126149 | root | "mock,1_day" | 0.61 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 0.72 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.81 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.63 | MC |
| SRR5126157 | root | "mock,7_days" | 0.43 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.49 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 2.11 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 1.94 | MC |
| SRR5126167 | root | "mock,14_days" | 0.43 | MC |
| SRR5126169 | root | "mock,14_days" | 0.49 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.07 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 1.25 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.63 | MC |
| SRR1213695 | root | wt | 0.31 | MC |
| SRR4947480 | root | control | 0.51 | MC |
| SRR4947489 | root | control | 0.46 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.39 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.06 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.01 | MC |
| SRR2154086 | seedling | wt | 0.74 | MC |
| SRR3098743 | seedling | wt | 0.17 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.83 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.52 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.15 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.69 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.70 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.37 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.50 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.36 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.58 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.97 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.95 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.90 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 0.78 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.91 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 0.99 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.68 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 1.56 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 1.08 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 1.95 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.76 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.11 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.76 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 0.34 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.11 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.71 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.53 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.39 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.73 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.20 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.34 | MC |