| SRR4457249 | 2nd_leaf | DAH4 | 1.07 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.08 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 1.09 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.94 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.38 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.36 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 1.94 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 1.88 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.98 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 1.68 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 1.35 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 1.29 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 1.00 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 1.56 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 0.91 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.22 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 1.23 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 0.71 | MC |
| SRR3745125 | anther | wt | 2.72 | MC |
| SRR3745126 | anther | wt | 1.97 | MC |
| SRR3745127 | anther | wt | 1.81 | MC |
| SRR358795 | callus | wt | 4.14 | MC |
| SRR358796 | callus | wt | 3.04 | MC |
| SRR358797 | callus | wt | 3.92 | MC |
| SRR358798 | callus | wt | 3.92 | MC |
| SRR7265400 | coleoptile | 2dA | 1.71 | MC |
| SRR7265401 | coleoptile | 2dA | 1.78 | MC |
| SRR7265402 | coleoptile | 2dA | 2.11 | MC |
| SRR7265403 | coleoptile | 2dN | 2.64 | MC |
| SRR7265404 | coleoptile | 2dN | 2.59 | MC |
| SRR7265405 | coleoptile | 2dN | 3.14 | MC |
| SRR7265406 | coleoptile | 3dA | 3.09 | MC |
| SRR7265407 | coleoptile | 3dA | 2.65 | MC |
| SRR7265408 | coleoptile | 3dA | 1.38 | MC |
| SRR7265409 | coleoptile | 3dN | 3.92 | MC |
| SRR7265410 | coleoptile | 3dN | 2.48 | MC |
| SRR7265411 | coleoptile | 3dN | 2.84 | MC |
| SRR7265412 | coleoptile | 4dA | 0.58 | MC |
| SRR7265413 | coleoptile | 4dA | 1.25 | MC |
| SRR7265414 | coleoptile | 4dA | 1.10 | MC |
| SRR7265415 | coleoptile | 4dN | 2.75 | MC |
| SRR7265416 | coleoptile | 4dN | 2.58 | MC |
| SRR7265417 | coleoptile | 4dN | 2.62 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 3.64 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.89 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.56 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.86 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.95 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.39 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.94 | MC |
| SRR7265382 | embryo | 3hA | 2.16 | MC |
| SRR7265383 | embryo | 3hA | 2.00 | MC |
| SRR7265384 | embryo | 3hA | 1.93 | MC |
| SRR7265385 | embryo | 3hN | 2.66 | MC |
| SRR7265386 | embryo | 3hN | 2.83 | MC |
| SRR7265387 | embryo | 3hN | 2.48 | MC |
| SRR7265388 | embryo | 12hA | 3.61 | MC |
| SRR7265389 | embryo | 12hA | 3.63 | MC |
| SRR7265390 | embryo | 12hA | 3.24 | MC |
| SRR7265394 | embryo | 24hA | 3.79 | MC |
| SRR7265395 | embryo | 24hA | 4.05 | MC |
| SRR7265396 | embryo | 24hA | 3.67 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.94 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.12 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.81 | MC |
| SRR4457234 | flag_leaf | DAH12 | 1.92 | MC |
| SRR4457235 | flag_leaf | DAH12 | 3.41 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.24 | MC |
| SRR4457237 | flag_leaf | DAH20 | 2.50 | MC |
| SRR4457238 | flag_leaf | DAH20 | 1.62 | MC |
| SRR4457239 | flag_leaf | DAH20 | 2.20 | MC |
| SRR4457240 | flag_leaf | DAH28 | 1.09 | MC |
| SRR4457241 | flag_leaf | DAH28 | 1.38 | MC |
| SRR4457242 | flag_leaf | DAH28 | 0.90 | MC |
| SRR4457243 | flag_leaf | DAH36 | 1.25 | MC |
| SRR4457244 | flag_leaf | DAH36 | 1.73 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.34 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.92 | MC |
| SRR4457247 | flag_leaf | DAH44 | 1.02 | MC |
| SRR4457248 | flag_leaf | DAH44 | 0.75 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.83 | MC |
| SRR8060835 | leaf | wild_type | 1.23 | MC |
| SRR8060836 | leaf | wild_type | 1.70 | MC |
| SRR8060837 | leaf | wild_type | 1.37 | MC |
| SRR8240824 | leaf | wild_type | 1.02 | MC |
| SRR8240825 | leaf | wild_type | 0.99 | MC |
| SRR8240826 | leaf | wild_type | 0.64 | MC |
| SRR8240818 | leaf | wild_type | 1.12 | MC |
| SRR8240819 | leaf | wild_type | 1.68 | MC |
| SRR8240820 | leaf | wild_type | 1.35 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.03 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 2.82 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 2.73 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.54 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.44 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.98 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.74 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.33 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 4.63 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.25 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.99 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.61 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.39 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.26 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.39 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.27 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.55 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.99 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 5.32 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.99 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 5.32 | MC |
| SRR1761528 | leaf | drought | 4.99 | MC |
| SRR1761529 | leaf | drought | 5.32 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.85 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.44 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.68 | MC |
| SRR6417967 | leaf | H2O_control | 1.70 | MC |
| SRR6417968 | leaf | H2O_control | 1.50 | MC |
| SRR6417969 | leaf | H2O_control | 2.91 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 3.48 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.60 | MC |
| SRR1213693 | leaf | wt | 2.71 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.46 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 4.16 | MC |
| SRR6502088 | leaf | control | 3.33 | MC |
| SRR6502089 | leaf | control | 3.49 | MC |
| SRR6502090 | leaf | control | 3.24 | MC |
| SRR6502100 | leaf | control | 3.06 | MC |
| SRR6502101 | leaf | control | 2.48 | MC |
| SRR5856934 | leaf | control | 0.26 | MC |
| SRR5856935 | leaf | control | 0.26 | MC |
| SRR5856936 | leaf | salt | 0.21 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.81 | MC |
| SRR6168979 | leaf | none (control) | 0.36 | MC |
| SRR6168980 | leaf | none (control) | 1.22 | MC |
| SRR8582888 | panicle | AM | 2.16 | MC |
| SRR8582889 | panicle | AM | 0.81 | MC |
| SRR8582890 | panicle | AM | 2.06 | MC |
| SRR8582891 | panicle | PM | 4.04 | MC |
| SRR8582892 | panicle | PM | 3.93 | MC |
| SRR8582893 | panicle | PM | 3.54 | MC |
| SRR5110429 | panicle | Dawn | 0.68 | MC |
| SRR5110430 | panicle | Dawn | 0.75 | MC |
| SRR5110431 | panicle | Dawn | 1.00 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 0.72 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.74 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.58 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.46 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.76 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.65 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.35 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 0.72 | MC |
| SRR5110445 | panicle | Dusk | 0.50 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.55 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.47 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.67 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.33 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.44 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.57 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.51 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.70 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.83 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.96 | MC |
| SRR1633182 | panicle | WT | 0.63 | MC |
| SRR1633185 | panicle | WT | 1.26 | MC |
| SRR5126147 | root | "mock,1_day" | 2.36 | MC |
| SRR5126148 | root | "mock,1_day" | 0.95 | MC |
| SRR5126149 | root | "mock,1_day" | 1.44 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.65 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.64 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.94 | MC |
| SRR5126153 | root | "mock,7_days" | 1.63 | MC |
| SRR5126155 | root | "mock,7_days" | 3.18 | MC |
| SRR5126157 | root | "mock,7_days" | 5.42 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.30 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 1.13 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.40 | MC |
| SRR5126165 | root | "mock,14_days" | 1.88 | MC |
| SRR5126167 | root | "mock,14_days" | 3.35 | MC |
| SRR5126169 | root | "mock,14_days" | 2.20 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.01 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.95 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 1.68 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.53 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.63 | MC |
| SRR1213694 | root | wt | 0.54 | MC |
| SRR4947483 | root | Al | 0.44 | MC |
| SRR4947500 | root | Al | 0.63 | MC |
| SRR4947501 | root | Al | 0.64 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.09 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.04 | MC |
| SRR6502093 | root | 100 mM NaCl | 3.30 | MC |
| SRR6502094 | root | control | 1.31 | MC |
| SRR6502095 | root | control | 1.67 | MC |
| SRR6502096 | root | control | 1.73 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.13 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.56 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.31 | MC |
| SRR6502106 | root | control | 1.62 | MC |
| SRR6502107 | root | control | 1.52 | MC |
| SRR6502108 | root | control | 2.11 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.73 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.13 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.68 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.32 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.92 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.23 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.59 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.25 | MC |
| SRR6441554 | seedling | wild_type | 2.10 | MC |
| SRR2154087 | seedling | wt | 4.06 | MC |
| SRR2857719 | seedling | drought_stress_0h | 3.30 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.15 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.13 | MC |
| SRR358791 | seedling | wt | 7.30 | MC |
| SRR358792 | seedling | wt | 7.52 | MC |
| SRR358793 | seedling | wt | 2.08 | MC |
| SRR358794 | seedling | wt | 2.39 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.91 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.53 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.20 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.68 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.79 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.98 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.73 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.30 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.40 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.27 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.54 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.36 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.94 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.32 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.48 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.35 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.97 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.79 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.14 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.88 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.81 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.51 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.88 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.26 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.09 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.30 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.68 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.97 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.42 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.61 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.69 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.25 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.42 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.41 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.73 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.39 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 3.57 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.80 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.84 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.88 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.28 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 0.52 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.14 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 0.74 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.87 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.83 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.67 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 0.69 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.62 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.62 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 1.75 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.49 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.05 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 6.10 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.55 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.27 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.18 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.95 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.61 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.29 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.27 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.40 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.43 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 1.69 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.94 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.90 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.74 | MC |