| SRR3745125 | anther | wt | 4.10 | MC |
| SRR3745126 | anther | wt | 4.20 | MC |
| SRR3745127 | anther | wt | 3.33 | MC |
| SRR358795 | callus | wt | 5.09 | MC |
| SRR358796 | callus | wt | 4.98 | MC |
| SRR358797 | callus | wt | 5.47 | MC |
| SRR358798 | callus | wt | 6.63 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.14 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.29 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.76 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.69 | MC |
| SRR7265408 | coleoptile | 3dA | 2.35 | MC |
| SRR7265412 | coleoptile | 4dA | 2.72 | MC |
| SRR7265414 | coleoptile | 4dA | 4.22 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.71 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.89 | MC |
| SRR2338866 | endosprem | control | 3.68 | MC |
| SRR2338867 | endosprem | control | 1.54 | MC |
| SRR2338868 | endosprem | high_temperature | 1.89 | MC |
| SRR2338869 | endosprem | high_temperature | 2.54 | MC |
| SRR976168 | flag_leaf | wild_type | 0.39 | MC |
| SRR8240824 | leaf | wild_type | 1.71 | MC |
| SRR8240825 | leaf | wild_type | 1.51 | MC |
| SRR8240826 | leaf | wild_type | 1.66 | MC |
| SRR8240818 | leaf | wild_type | 1.12 | MC |
| SRR8240819 | leaf | wild_type | 1.90 | MC |
| SRR8240820 | leaf | wild_type | 2.22 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.17 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.31 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 4.06 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.88 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.77 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.52 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.98 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.13 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.23 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.36 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.96 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.42 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.93 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.93 | MC |
| SRR1761529 | leaf | drought | 4.93 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.99 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.55 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 3.33 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.48 | MC |
| SRR6168979 | leaf | none (control) | 0.54 | MC |
| SRR6168981 | leaf | none (control) | 1.43 | MC |
| SRR8582888 | panicle | AM | 2.89 | MC |
| SRR8582889 | panicle | AM | 1.36 | MC |
| SRR4947496 | root | control | 1.06 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.30 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 1.48 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.60 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.39 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.86 | MC |
| SRR5126147 | root | "mock,1_day" | 2.77 | MC |
| SRR5126148 | root | "mock,1_day" | 1.29 | MC |
| SRR5126149 | root | "mock,1_day" | 2.15 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.55 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.21 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.84 | MC |
| SRR5126153 | root | "mock,7_days" | 3.46 | MC |
| SRR5126155 | root | "mock,7_days" | 3.79 | MC |
| SRR5126157 | root | "mock,7_days" | 5.21 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.45 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.27 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 4.03 | MC |
| SRR5126165 | root | "mock,14_days" | 4.67 | MC |
| SRR5126167 | root | "mock,14_days" | 3.10 | MC |
| SRR5126169 | root | "mock,14_days" | 3.95 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.14 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 2.99 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.47 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.79 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.34 | MC |
| SRR1213694 | root | wt | 1.11 | MC |
| SRR4947480 | root | control | 0.87 | MC |
| SRR4947481 | root | control | 2.82 | MC |
| SRR4947484 | root | Al | 0.90 | MC |
| SRR4947485 | root | Al | 1.31 | MC |
| SRR4947488 | root | control | 0.96 | MC |
| SRR4947489 | root | control | 0.84 | MC |
| SRR4947492 | root | Al | 1.47 | MC |
| SRR4947493 | root | Al | 1.74 | MC |
| SRR4947497 | root | control | 1.61 | MC |
| SRR4947500 | root | Al | 1.75 | MC |
| SRR4947501 | root | Al | 1.45 | MC |
| SRR4947504 | root | control | 1.31 | MC |
| SRR4947505 | root | control | 1.86 | MC |
| SRR4947508 | root | Al | 2.53 | MC |
| SRR4947509 | root | Al | 1.94 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.70 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.64 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.74 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.93 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.61 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.83 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.78 | MC |
| SRR2154085 | seedling | wt | 3.19 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.56 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.83 | MC |
| SRR358793 | seedling | wt | 2.59 | MC |
| SRR358794 | seedling | wt | 2.70 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.08 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.09 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.89 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.08 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.10 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.82 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.29 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.33 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.50 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.64 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.35 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.50 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.08 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.32 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.60 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.41 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.55 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.06 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 3.87 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.75 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 4.32 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 3.24 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.32 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.51 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 3.86 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.68 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.34 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 1.76 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 2.99 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.46 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 4.50 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 5.01 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 5.85 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.37 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 3.69 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 3.95 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.65 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 6.90 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 3.65 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.17 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 4.04 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.62 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.69 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.45 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.63 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.19 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.30 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.25 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.80 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 3.49 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.18 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.79 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.72 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 2.97 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 4.11 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.38 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 2.80 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.64 | MC |