| SRR4457263 | 2nd_leaf | DAH36 | 4.69 | MC |
| SRR3745125 | anther | wt | 2.33 | MC |
| SRR3745126 | anther | wt | 3.07 | MC |
| SRR3745127 | anther | wt | 3.09 | MC |
| SRR6320473 | carpel | wt | 1.97 | MC |
| SRR6320498 | carpel | wt | 1.59 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 3.08 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 3.22 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.40 | MC |
| SRR4947495 | root | control | 4.05 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.32 | MC |
| SRR7265400 | coleoptile | 2dA | 2.85 | MC |
| SRR7265401 | coleoptile | 2dA | 2.03 | MC |
| SRR7265402 | coleoptile | 2dA | 2.27 | MC |
| SRR7265403 | coleoptile | 2dN | 3.45 | MC |
| SRR7265404 | coleoptile | 2dN | 3.04 | MC |
| SRR7265405 | coleoptile | 2dN | 2.98 | MC |
| SRR7265406 | coleoptile | 3dA | 1.36 | MC |
| SRR7265407 | coleoptile | 3dA | 1.48 | MC |
| SRR7265408 | coleoptile | 3dA | 0.82 | MC |
| SRR7265409 | coleoptile | 3dN | 1.14 | MC |
| SRR7265410 | coleoptile | 3dN | 1.10 | MC |
| SRR7265411 | coleoptile | 3dN | 0.97 | MC |
| SRR7265412 | coleoptile | 4dA | 1.77 | MC |
| SRR7265413 | coleoptile | 4dA | 4.35 | MC |
| SRR7265414 | coleoptile | 4dA | 2.96 | MC |
| SRR7265415 | coleoptile | 4dN | 1.36 | MC |
| SRR7265416 | coleoptile | 4dN | 1.03 | MC |
| SRR7265417 | coleoptile | 4dN | 1.36 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.16 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 1.14 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.82 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.95 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 1.49 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.91 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.91 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.21 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.00 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.17 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.80 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.70 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.64 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 2.61 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.63 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.93 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.49 | MC |
| SRR7265376 | embryo | 1hA | 1.24 | MC |
| SRR7265377 | embryo | 1hA | 1.79 | MC |
| SRR7265378 | embryo | 1hA | 1.82 | MC |
| SRR7265379 | embryo | 1hN | 1.67 | MC |
| SRR7265380 | embryo | 1hN | 1.68 | MC |
| SRR7265381 | embryo | 1hN | 1.58 | MC |
| SRR7265382 | embryo | 3hA | 2.74 | MC |
| SRR7265383 | embryo | 3hA | 2.14 | MC |
| SRR7265384 | embryo | 3hA | 2.21 | MC |
| SRR7265385 | embryo | 3hN | 1.63 | MC |
| SRR7265386 | embryo | 3hN | 1.31 | MC |
| SRR7265387 | embryo | 3hN | 1.82 | MC |
| SRR7265394 | embryo | 24hA | 3.82 | MC |
| SRR7265396 | embryo | 24hA | 4.80 | MC |
| SRR7265397 | embryo | 24hN | 5.02 | MC |
| SRR7265398 | embryo | 24hN | 4.42 | MC |
| SRR2338866 | endosprem | control | 4.16 | MC |
| SRR2338868 | endosprem | high_temperature | 1.46 | MC |
| SRR2338869 | endosprem | high_temperature | 3.07 | MC |
| SRR976168 | flag_leaf | wild_type | 0.90 | MC |
| SRR8240824 | leaf | wild_type | 1.57 | MC |
| SRR8240825 | leaf | wild_type | 1.78 | MC |
| SRR8240826 | leaf | wild_type | 1.58 | MC |
| SRR8240818 | leaf | wild_type | 1.56 | MC |
| SRR8240819 | leaf | wild_type | 2.34 | MC |
| SRR8240820 | leaf | wild_type | 2.47 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.00 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.36 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 4.96 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.70 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.97 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 4.76 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.30 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.47 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.30 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.55 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.16 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.69 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 3.23 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.25 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.46 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 3.23 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.25 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.46 | MC |
| SRR1761528 | leaf | drought | 3.23 | MC |
| SRR1761529 | leaf | drought | 3.25 | MC |
| SRR1761530 | leaf | control | 5.46 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.21 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.13 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.11 | MC |
| SRR6417967 | leaf | H2O_control | 2.60 | MC |
| SRR6417968 | leaf | H2O_control | 1.72 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 2.55 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 2.17 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.13 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.28 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.13 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.33 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.77 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.06 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.20 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.92 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.80 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.18 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 3.48 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 3.28 | MC |
| SRR6502089 | leaf | control | 3.45 | MC |
| SRR6502090 | leaf | control | 3.64 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 4.34 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.30 | MC |
| SRR6502100 | leaf | control | 3.30 | MC |
| SRR6502101 | leaf | control | 4.27 | MC |
| SRR6502102 | leaf | control | 3.64 | MC |
| SRR5856927 | leaf | control | 2.19 | MC |
| SRR5856928 | leaf | control | 1.54 | MC |
| SRR5856929 | leaf | control | 1.85 | MC |
| SRR5856930 | leaf | salt | 0.52 | MC |
| SRR5856931 | leaf | salt | 0.77 | MC |
| SRR5856932 | leaf | salt | 0.52 | MC |
| SRR5856933 | leaf | control | 2.14 | MC |
| SRR5856934 | leaf | control | 1.83 | MC |
| SRR5856935 | leaf | control | 2.17 | MC |
| SRR5856936 | leaf | salt | 0.95 | MC |
| SRR5856937 | leaf | salt | 0.87 | MC |
| SRR5856938 | leaf | salt | 1.05 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.79 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 4.26 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 3.52 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.21 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.21 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.26 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.26 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 1.30 | MC |
| SRR6168974 | leaf | none (control) | 4.56 | MC |
| SRR6168975 | leaf | none (control) | 4.17 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 5.79 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.60 | MC |
| SRR6168980 | leaf | none (control) | 0.36 | MC |
| SRR6168981 | leaf | none (control) | 1.59 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.81 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.45 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.39 | MC |
| SRR5110429 | panicle | Dawn | 3.37 | MC |
| SRR5110430 | panicle | Dawn | 2.21 | MC |
| SRR5110431 | panicle | Dawn | 2.41 | MC |
| SRR5110432 | panicle | Dawn | 2.84 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 1.47 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.26 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.32 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.35 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.45 | MC |
| SRR5110438 | panicle | Dawn + 7h | 2.66 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.40 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.53 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.90 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.22 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.50 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.77 | MC |
| SRR5110445 | panicle | Dusk | 2.94 | MC |
| SRR5110446 | panicle | Dusk | 3.96 | MC |
| SRR5110447 | panicle | Dusk | 3.21 | MC |
| SRR5110448 | panicle | Dusk | 4.70 | MC |
| SRR5110449 | panicle | Dawn + 14h | 3.44 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.77 | MC |
| SRR5110452 | panicle | Dawn + 14h | 4.05 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.86 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.66 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.05 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.59 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.75 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.76 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.19 | MC |
| SRR5110460 | panicle | Dawn + 21h | 2.70 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 2.34 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.87 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.69 | MC |
| SRR4947478 | root | control | 2.66 | MC |
| SRR4947479 | root | control | 2.26 | MC |
| SRR4947480 | root | control | 5.01 | MC |
| SRR4947481 | root | control | 5.26 | MC |
| SRR4947482 | root | Al | 3.22 | MC |
| SRR4947483 | root | Al | 1.88 | MC |
| SRR4947484 | root | Al | 3.92 | MC |
| SRR4947487 | root | control | 2.28 | MC |
| SRR4947489 | root | control | 4.68 | MC |
| SRR4947490 | root | Al | 1.92 | MC |
| SRR4947491 | root | Al | 3.69 | MC |
| SRR4947493 | root | Al | 4.69 | MC |
| SRR4947494 | root | control | 2.38 | MC |
| SRR4947498 | root | Al | 3.63 | MC |
| SRR4947499 | root | Al | 3.92 | MC |
| SRR4947500 | root | Al | 5.61 | MC |
| SRR4947502 | root | control | 5.20 | MC |
| SRR4947503 | root | control | 3.58 | MC |
| SRR4947506 | root | Al | 2.58 | MC |
| SRR4947507 | root | Al | 3.75 | MC |
| SRR4947509 | root | Al | 4.83 | MC |
| SRR1740434 | root_differentiation_zone | wt | 2.39 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.74 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.91 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.84 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.55 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.56 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.33 | MC |
| SRR6441555 | seedling | wild_type | 2.73 | MC |
| SRR2154083 | seedling | wt | 2.92 | MC |
| SRR2154084 | seedling | wt | 3.49 | MC |
| SRR2154085 | seedling | wt | 4.44 | MC |
| SRR3098743 | seedling | wt | 2.52 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.63 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.38 | MC |
| SRR1944583 | seedling | no_treatment | 2.27 | MC |
| SRR358791 | seedling | wt | 2.29 | MC |
| SRR358792 | seedling | wt | 2.71 | MC |
| SRR358793 | seedling | wt | 2.11 | MC |
| SRR358794 | seedling | wt | 2.48 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.72 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.38 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.90 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.27 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.79 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.79 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.86 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.56 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.02 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.19 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.72 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.91 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.02 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.65 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.01 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.78 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.91 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.41 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 1.20 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.50 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.01 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.93 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 3.14 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.55 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.34 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.77 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.48 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.26 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.09 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.89 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 14.54 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.51 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.57 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.85 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 5.17 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.79 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.87 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.38 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.91 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 4.42 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.83 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 4.68 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.66 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.07 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 2.67 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.94 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.60 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.92 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 2.26 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.59 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.31 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 2.07 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.22 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.04 | MC |