| SRR4457249 | 2nd_leaf | DAH4 | 3.74 | MC |
| SRR3745125 | anther | wt | 1.14 | MC |
| SRR3745126 | anther | wt | 2.76 | MC |
| SRR3745127 | anther | wt | 4.58 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 1.49 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 0.50 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.85 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 0.71 | MC |
| SRR7265407 | coleoptile | 3dA | 0.51 | MC |
| SRR7265412 | coleoptile | 4dA | 1.12 | MC |
| SRR7265413 | coleoptile | 4dA | 0.56 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.47 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.11 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.17 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.94 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.59 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.32 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.05 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.70 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.57 | MC |
| SRR7265378 | embryo | 1hA | 0.23 | MC |
| SRR2338866 | endosprem | control | 1.70 | MC |
| SRR2338868 | endosprem | high_temperature | 0.79 | MC |
| SRR976168 | flag_leaf | wild_type | 1.62 | MC |
| SRR1213690 | flower | wt(flower buds) | 0.83 | MC |
| SRR1213691 | flower | wt | 1.20 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 0.52 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 1.69 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 1.71 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.91 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.66 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 5.32 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.70 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.48 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.87 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.34 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.12 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.89 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.83 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.89 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.83 | MC |
| SRR1761528 | leaf | drought | 4.89 | MC |
| SRR1761529 | leaf | drought | 4.83 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.82 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.51 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.34 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.51 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.60 | MC |
| SRR1213692 | leaf | wt | 2.55 | MC |
| SRR6502100 | leaf | control | 3.26 | MC |
| SRR6502102 | leaf | control | 4.45 | MC |
| SRR5856927 | leaf | control | 0.39 | MC |
| SRR5856930 | leaf | salt | 0.76 | MC |
| SRR5856931 | leaf | salt | 0.55 | MC |
| SRR5856932 | leaf | salt | 0.51 | MC |
| SRR5856934 | leaf | control | 0.56 | MC |
| SRR5856935 | leaf | control | 0.46 | MC |
| SRR5856936 | leaf | salt | 0.29 | MC |
| SRR5856937 | leaf | salt | 0.64 | MC |
| SRR5856938 | leaf | salt | 0.59 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.74 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.54 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 9.23 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 7.45 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.57 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 6.85 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.54 | MC |
| SRR6168975 | leaf | none (control) | 0.99 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.41 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 1.41 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.30 | MC |
| SRR8582891 | panicle | PM | 3.81 | MC |
| SRR8582892 | panicle | PM | 2.72 | MC |
| SRR5110429 | panicle | Dawn | 1.96 | MC |
| SRR5110430 | panicle | Dawn | 2.58 | MC |
| SRR5110431 | panicle | Dawn | 2.79 | MC |
| SRR5110432 | panicle | Dawn | 1.68 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.36 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.73 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.10 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 0.90 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.97 | MC |
| SRR5110438 | panicle | Dawn + 7h | 4.23 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.98 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.70 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.37 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 3.98 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.02 | MC |
| SRR5110445 | panicle | Dusk | 4.28 | MC |
| SRR5110446 | panicle | Dusk | 2.76 | MC |
| SRR5110448 | panicle | Dusk | 3.49 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.50 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.13 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.65 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.05 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.63 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 2.32 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.63 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 2.50 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.24 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.42 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.50 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.94 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.61 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.33 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.59 | MC |
| SRR5126147 | root | "mock,1_day" | 2.58 | MC |
| SRR5126148 | root | "mock,1_day" | 0.84 | MC |
| SRR5126149 | root | "mock,1_day" | 0.49 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.34 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.11 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.06 | MC |
| SRR5126155 | root | "mock,7_days" | 1.16 | MC |
| SRR5126157 | root | "mock,7_days" | 0.41 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 1.80 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 0.55 | MC |
| SRR5126165 | root | "mock,14_days" | 2.09 | MC |
| SRR5126167 | root | "mock,14_days" | 1.37 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 0.58 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.84 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.34 | MC |
| SRR4947483 | root | Al | 0.73 | MC |
| SRR4947502 | root | control | 0.54 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.35 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.64 | MC |
| SRR6502093 | root | 100 mM NaCl | 0.52 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.38 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.32 | MC |
| SRR2154086 | seedling | wt | 3.73 | MC |
| SRR2857720 | seedling | drought_stress_1h | 3.16 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.10 | MC |
| SRR358791 | seedling | wt | 2.81 | MC |
| SRR358792 | seedling | wt | 1.03 | MC |
| SRR358793 | seedling | wt | 3.89 | MC |
| SRR358794 | seedling | wt | 3.38 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.40 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 12.60 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.73 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.75 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.00 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.17 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.49 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.96 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.06 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.80 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 2.84 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.60 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.67 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.61 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.09 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.49 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.79 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.19 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.11 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.62 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.75 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 1.41 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.90 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.04 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.18 | MC |