| SRR5560727 | caryopsis | wild_type | 0.50 | MC |
| SRR5560728 | caryopsis | wild_type | 0.50 | MC |
| SRR5560729 | caryopsis | wild_type | 1.11 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.83 | MC |
| SRR7265406 | coleoptile | 3dA | 0.31 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.70 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.83 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 2.05 | MC |
| SRR2338866 | endosprem | control | 4.50 | MC |
| SRR2338867 | endosprem | control | 1.32 | MC |
| SRR2338868 | endosprem | high_temperature | 2.01 | MC |
| SRR976168 | flag_leaf | wild_type | 1.47 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.61 | MC |
| SRR8240825 | leaf | wild_type | 2.13 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.49 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.82 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.49 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.22 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.40 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.34 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.67 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.25 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.48 | MC |
| SRR504365 | leaf | wt | 0.39 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.31 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.50 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.88 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.30 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.33 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.25 | MC |
| SRR1213693 | leaf | wt | 0.26 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.61 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.15 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.65 | MC |
| SRR6502088 | leaf | control | 2.22 | MC |
| SRR6502089 | leaf | control | 0.76 | MC |
| SRR6502090 | leaf | control | 0.37 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.34 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.53 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 1.11 | MC |
| SRR6502100 | leaf | control | 0.76 | MC |
| SRR6502101 | leaf | control | 0.83 | MC |
| SRR6502102 | leaf | control | 1.02 | MC |
| SRR6168981 | leaf | none (control) | 0.91 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.79 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.22 | MC |
| SRR8582888 | panicle | AM | 0.34 | MC |
| SRR8582889 | panicle | AM | 0.50 | MC |
| SRR8582890 | panicle | AM | 0.83 | MC |
| SRR8582891 | panicle | PM | 0.47 | MC |
| SRR8582893 | panicle | PM | 0.77 | MC |
| SRR4947496 | root | control | 1.12 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.91 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.88 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 3.62 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 2.99 | MC |
| SRR5126147 | root | "mock,1_day" | 0.31 | MC |
| SRR5126148 | root | "mock,1_day" | 0.44 | MC |
| SRR5126153 | root | "mock,7_days" | 0.79 | MC |
| SRR5126155 | root | "mock,7_days" | 0.39 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.79 | MC |
| SRR5126165 | root | "mock,14_days" | 0.68 | MC |
| SRR5126169 | root | "mock,14_days" | 0.70 | MC |
| SRR1213694 | root | wt | 0.25 | MC |
| SRR1213695 | root | wt | 0.27 | MC |
| SRR4947480 | root | control | 1.08 | MC |
| SRR4947481 | root | control | 1.02 | MC |
| SRR4947484 | root | Al | 1.28 | MC |
| SRR4947485 | root | Al | 1.11 | MC |
| SRR4947488 | root | control | 1.18 | MC |
| SRR4947489 | root | control | 0.73 | MC |
| SRR4947492 | root | Al | 1.86 | MC |
| SRR4947497 | root | control | 1.15 | MC |
| SRR4947500 | root | Al | 1.62 | MC |
| SRR4947501 | root | Al | 0.66 | MC |
| SRR4947504 | root | control | 1.76 | MC |
| SRR4947505 | root | control | 0.82 | MC |
| SRR4947508 | root | Al | 1.84 | MC |
| SRR4947509 | root | Al | 1.36 | MC |
| SRR6502091 | root | 100 mM NaCl | 0.37 | MC |
| SRR6502092 | root | 100 mM NaCl | 0.37 | MC |
| SRR6502095 | root | control | 0.51 | MC |
| SRR6502104 | root | 100 mM NaCl | 0.40 | MC |
| SRR6502105 | root | 100 mM NaCl | 0.87 | MC |
| SRR6502106 | root | control | 0.80 | MC |
| SRR6502107 | root | control | 0.57 | MC |
| SRR2154082 | seedling | wt | 1.46 | MC |
| SRR2154083 | seedling | wt | 0.85 | MC |
| SRR2154084 | seedling | wt | 2.99 | MC |
| SRR2154085 | seedling | wt | 1.08 | MC |
| SRR2857719 | seedling | drought_stress_0h | 4.33 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.83 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.53 | MC |
| SRR358793 | seedling | wt | 0.95 | MC |
| SRR358794 | seedling | wt | 1.00 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.36 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.31 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.29 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.22 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.32 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.30 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.04 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.88 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.76 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.12 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.89 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.76 | MC |