| SRR4457249 | 2nd_leaf | DAH4 | 0.82 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 0.62 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.54 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.72 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.79 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.74 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.44 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 0.59 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 1.13 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.24 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.79 | MC |
| SRR3745125 | anther | wt | 0.88 | MC |
| SRR3745126 | anther | wt | 0.83 | MC |
| SRR3745127 | anther | wt | 0.55 | MC |
| SRR5560728 | caryopsis | wild_type | 0.27 | MC |
| SRR7265400 | coleoptile | 2dA | 0.77 | MC |
| SRR7265401 | coleoptile | 2dA | 0.46 | MC |
| SRR7265402 | coleoptile | 2dA | 0.51 | MC |
| SRR7265403 | coleoptile | 2dN | 0.49 | MC |
| SRR7265404 | coleoptile | 2dN | 0.41 | MC |
| SRR7265405 | coleoptile | 2dN | 0.31 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.19 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.25 | MC |
| SRR7265376 | embryo | 1hA | 0.58 | MC |
| SRR7265377 | embryo | 1hA | 0.61 | MC |
| SRR7265378 | embryo | 1hA | 0.62 | MC |
| SRR7265379 | embryo | 1hN | 0.99 | MC |
| SRR7265380 | embryo | 1hN | 0.77 | MC |
| SRR7265381 | embryo | 1hN | 0.72 | MC |
| SRR7265384 | embryo | 3hA | 0.52 | MC |
| SRR7265385 | embryo | 3hN | 0.57 | MC |
| SRR7265386 | embryo | 3hN | 0.60 | MC |
| SRR7265387 | embryo | 3hN | 0.39 | MC |
| SRR7265388 | embryo | 12hA | 0.52 | MC |
| SRR7265391 | embryo | 12hN | 0.44 | MC |
| SRR7265395 | embryo | 24hA | 0.54 | MC |
| SRR7265397 | embryo | 24hN | 0.64 | MC |
| SRR7265398 | embryo | 24hN | 0.65 | MC |
| SRR7265399 | embryo | 24hN | 0.49 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.48 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.86 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.74 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.76 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.47 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.40 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.42 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.44 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.50 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.62 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.70 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.52 | MC |
| SRR1213691 | flower | wt | 0.37 | MC |
| SRR8060835 | leaf | wild_type | 0.55 | MC |
| SRR8060836 | leaf | wild_type | 0.65 | MC |
| SRR8060837 | leaf | wild_type | 0.44 | MC |
| SRR8240818 | leaf | wild_type | 0.33 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.56 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.58 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.46 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.73 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.43 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.35 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.29 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.38 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.43 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.82 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.53 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.77 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.49 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.65 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.46 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.44 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 0.67 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.66 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.51 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 2.53 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 1.51 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 0.46 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.51 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 2.53 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 1.51 | MC |
| SRR1761529 | leaf | drought | 0.51 | MC |
| SRR1761530 | leaf | control | 2.53 | MC |
| SRR1761531 | leaf | control | 1.51 | MC |
| SRR504365 | leaf | wt | 1.39 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.55 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.39 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.32 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.38 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.33 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.28 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.58 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.58 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.36 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.64 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.22 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 0.58 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 0.44 | MC |
| SRR1213692 | leaf | wt | 0.89 | MC |
| SRR1213693 | leaf | wt | 0.29 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.68 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.50 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.94 | MC |
| SRR6502088 | leaf | control | 0.72 | MC |
| SRR6502089 | leaf | control | 0.65 | MC |
| SRR6502090 | leaf | control | 0.43 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 1.22 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.12 | MC |
| SRR6502100 | leaf | control | 0.44 | MC |
| SRR6502101 | leaf | control | 0.61 | MC |
| SRR6502102 | leaf | control | 0.61 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.21 | MC |
| SRR8582889 | panicle | AM | 0.13 | MC |
| SRR8582890 | panicle | AM | 0.27 | MC |
| SRR8582891 | panicle | PM | 0.71 | MC |
| SRR8582892 | panicle | PM | 1.12 | MC |
| SRR8582893 | panicle | PM | 0.58 | MC |
| SRR5110429 | panicle | Dawn | 0.42 | MC |
| SRR5110431 | panicle | Dawn | 0.34 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.48 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.39 | MC |
| SRR5110446 | panicle | Dusk | 0.36 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.42 | MC |
| SRR5110452 | panicle | Dawn + 14h | 0.68 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.71 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.47 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.52 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.21 | MC |
| SRR1213695 | root | wt | 0.47 | MC |
| SRR6502096 | root | control | 0.37 | MC |
| SRR2154086 | seedling | wt | 0.48 | MC |
| SRR2154082 | seedling | wt | 0.38 | MC |
| SRR2154087 | seedling | wt | 0.40 | MC |
| SRR3098741 | seedling | wt | 0.55 | MC |
| SRR3098742 | seedling | wt | 0.58 | MC |
| SRR3098743 | seedling | wt | 0.57 | MC |
| SRR1944583 | seedling | no_treatment | 0.83 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.63 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.77 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.18 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.54 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.58 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.44 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.50 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.93 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.50 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.29 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.25 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.17 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 0.45 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 0.51 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.74 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.41 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.42 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.37 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 0.34 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.90 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 0.71 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.69 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.68 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.68 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.40 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.31 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.38 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 0.83 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 0.40 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 0.47 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.12 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.17 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.44 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 0.50 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.55 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.30 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.25 | MC |