| SRR4457249 | 2nd_leaf | DAH4 | 5.21 | MC |
| SRR358795 | callus | wt | 1.63 | MC |
| SRR358796 | callus | wt | 1.19 | MC |
| SRR358798 | callus | wt | 0.89 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 2.84 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 2.50 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 1.22 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.37 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.23 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.63 | MC |
| SRR2338867 | endosprem | control | 0.82 | MC |
| SRR2338868 | endosprem | high_temperature | 1.07 | MC |
| SRR2338869 | endosprem | high_temperature | 1.00 | MC |
| SRR976168 | flag_leaf | wild_type | 0.52 | MC |
| SRR8240824 | leaf | wild_type | 2.48 | MC |
| SRR8240825 | leaf | wild_type | 1.70 | MC |
| SRR8240826 | leaf | wild_type | 0.95 | MC |
| SRR8240818 | leaf | wild_type | 0.70 | MC |
| SRR8240819 | leaf | wild_type | 1.52 | MC |
| SRR8240820 | leaf | wild_type | 1.49 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.22 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.32 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.86 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.10 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 4.15 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.42 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.40 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.80 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 3.73 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.34 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.04 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.21 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 3.85 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.71 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 3.39 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 3.63 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.95 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 2.76 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.94 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.92 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.45 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 2.93 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.59 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.71 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.49 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 2.76 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.36 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 3.69 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.97 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 3.43 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.74 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.94 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 2.69 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.74 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 2.69 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.74 | MC |
| SRR1761528 | leaf | drought | 2.69 | MC |
| SRR1761529 | leaf | drought | 2.74 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.24 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.60 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 0.72 | MC |
| SRR6417967 | leaf | H2O_control | 1.06 | MC |
| SRR6417968 | leaf | H2O_control | 1.20 | MC |
| SRR6417969 | leaf | H2O_control | 1.41 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.24 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 2.07 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 1.41 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 1.35 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 1.89 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 1.55 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 1.63 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 1.33 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 2.09 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.37 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.45 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.16 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.42 | MC |
| SRR6502100 | leaf | control | 0.34 | MC |
| SRR8582888 | panicle | AM | 2.48 | MC |
| SRR8582889 | panicle | AM | 1.06 | MC |
| SRR8582891 | panicle | PM | 5.74 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.05 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.24 | MC |
| SRR1633182 | panicle | WT | 1.21 | MC |
| SRR1633185 | panicle | WT | 2.63 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.49 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.79 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 1.37 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 1.76 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 4.00 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 3.67 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 0.90 | MC |
| SRR5126167 | root | "mock,14_days" | 0.28 | MC |
| SRR1213694 | root | wt | 0.45 | MC |
| SRR6441554 | seedling | wild_type | 1.88 | MC |
| SRR6441555 | seedling | wild_type | 2.36 | MC |
| SRR2154086 | seedling | wt | 3.88 | MC |
| SRR2154085 | seedling | wt | 2.58 | MC |
| SRR2154087 | seedling | wt | 3.54 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.83 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.88 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.32 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.17 | MC |
| SRR358791 | seedling | wt | 7.25 | MC |
| SRR358792 | seedling | wt | 6.42 | MC |
| SRR358793 | seedling | wt | 3.34 | MC |
| SRR358794 | seedling | wt | 2.28 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 3.40 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.09 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.07 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 8.28 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.44 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.67 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.73 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.14 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.49 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.01 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.99 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.89 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.81 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.83 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.11 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.72 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.08 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.84 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.68 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.61 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.82 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 0.79 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 0.73 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.76 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 0.78 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 0.67 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.77 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 0.55 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 0.81 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 0.78 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 0.60 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 0.66 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.81 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 2.24 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 1.33 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.20 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 1.49 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 1.20 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.61 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 1.58 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 0.82 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 0.68 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 0.39 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 1.40 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 1.31 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 2.19 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.76 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.64 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.80 | MC |