| SRR4457258 | 2nd_leaf | DAH28 | 0.24 | MC |
| SRR3745125 | anther | wt | 2.03 | MC |
| SRR3745126 | anther | wt | 1.25 | MC |
| SRR3745127 | anther | wt | 0.83 | MC |
| SRR358795 | callus | wt | 5.78 | MC |
| SRR358796 | callus | wt | 5.35 | MC |
| SRR358797 | callus | wt | 5.88 | MC |
| SRR358798 | callus | wt | 6.27 | MC |
| SRR6320473 | carpel | wt | 2.92 | MC |
| SRR6320498 | carpel | wt | 3.21 | MC |
| SRR5560727 | caryopsis | wild_type | 2.69 | MC |
| SRR5560728 | caryopsis | wild_type | 5.19 | MC |
| SRR7265410 | coleoptile | 3dN | 3.71 | MC |
| SRR7265411 | coleoptile | 3dN | 3.62 | MC |
| SRR7265412 | coleoptile | 4dA | 0.41 | MC |
| SRR7265413 | coleoptile | 4dA | 3.84 | MC |
| SRR7265414 | coleoptile | 4dA | 1.37 | MC |
| SRR7265415 | coleoptile | 4dN | 4.10 | MC |
| SRR7265416 | coleoptile | 4dN | 3.89 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.79 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.96 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.36 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.50 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.65 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.54 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 1.67 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.19 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.29 | MC |
| SRR7265376 | embryo | 1hA | 0.40 | MC |
| SRR7265381 | embryo | 1hN | 0.28 | MC |
| SRR7265382 | embryo | 3hA | 0.81 | MC |
| SRR7265384 | embryo | 3hA | 0.35 | MC |
| SRR7265391 | embryo | 12hN | 4.26 | MC |
| SRR7265392 | embryo | 12hN | 4.14 | MC |
| SRR7265393 | embryo | 12hN | 3.91 | MC |
| SRR2338866 | endosprem | control | 2.01 | MC |
| SRR2338867 | endosprem | control | 0.51 | MC |
| SRR2338868 | endosprem | high_temperature | 2.31 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.19 | MC |
| SRR8060835 | leaf | wild_type | 0.28 | MC |
| SRR8060836 | leaf | wild_type | 0.94 | MC |
| SRR8060837 | leaf | wild_type | 0.34 | MC |
| SRR8240824 | leaf | wild_type | 0.72 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.82 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.17 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.44 | MC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 0.49 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.66 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 1.58 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.51 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.52 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.23 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 0.63 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.62 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.45 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.52 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.58 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.03 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.71 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.87 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.79 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 0.82 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.66 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.79 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.54 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.38 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 0.48 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 0.48 | MC |
| SRR1761530 | leaf | control | 0.48 | MC |
| SRR504365 | leaf | wt | 0.31 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.24 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.28 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.76 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.68 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.75 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.70 | MC |
| SRR1213692 | leaf | wt | 0.38 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 0.66 | MC |
| SRR6502088 | leaf | control | 0.63 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.67 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.36 | MC |
| SRR6502100 | leaf | control | 0.64 | MC |
| SRR6502101 | leaf | control | 0.43 | MC |
| SRR5856927 | leaf | control | 1.26 | MC |
| SRR5856928 | leaf | control | 1.29 | MC |
| SRR5856929 | leaf | control | 0.88 | MC |
| SRR5856930 | leaf | salt | 0.29 | MC |
| SRR5856931 | leaf | salt | 0.65 | MC |
| SRR5856932 | leaf | salt | 0.46 | MC |
| SRR5856933 | leaf | control | 1.87 | MC |
| SRR5856934 | leaf | control | 1.52 | MC |
| SRR5856935 | leaf | control | 1.97 | MC |
| SRR5856936 | leaf | salt | 0.63 | MC |
| SRR5856937 | leaf | salt | 0.45 | MC |
| SRR5856938 | leaf | salt | 0.55 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.72 | MC |
| SRR6168975 | leaf | none (control) | 2.24 | MC |
| SRR6168981 | leaf | none (control) | 0.36 | MC |
| SRR8582888 | panicle | AM | 0.62 | MC |
| SRR8582889 | panicle | AM | 0.52 | MC |
| SRR8582890 | panicle | AM | 0.41 | MC |
| SRR8582891 | panicle | PM | 0.82 | MC |
| SRR8582892 | panicle | PM | 0.79 | MC |
| SRR8582893 | panicle | PM | 0.93 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.75 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.67 | MC |
| SRR5110445 | panicle | Dusk | 3.67 | MC |
| SRR5110449 | panicle | Dawn + 14h | 6.15 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.55 | MC |
| SRR5126149 | root | "mock,1_day" | 2.42 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 4.34 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 3.41 | MC |
| SRR5126155 | root | "mock,7_days" | 3.46 | MC |
| SRR5126157 | root | "mock,7_days" | 3.23 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 2.95 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.51 | MC |
| SRR5126165 | root | "mock,14_days" | 2.91 | MC |
| SRR5126167 | root | "mock,14_days" | 1.66 | MC |
| SRR5126169 | root | "mock,14_days" | 3.98 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.82 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.12 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 2.58 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.42 | MC |
| SRR1213694 | root | wt | 0.80 | MC |
| SRR1213695 | root | wt | 0.35 | MC |
| SRR4947478 | root | control | 3.71 | MC |
| SRR4947482 | root | Al | 3.33 | MC |
| SRR4947483 | root | Al | 3.98 | MC |
| SRR4947487 | root | control | 4.40 | MC |
| SRR4947498 | root | Al | 5.81 | MC |
| SRR4947506 | root | Al | 3.82 | MC |
| SRR6502091 | root | 100 mM NaCl | 2.96 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.53 | MC |
| SRR6502093 | root | 100 mM NaCl | 4.55 | MC |
| SRR6502094 | root | control | 3.34 | MC |
| SRR6502095 | root | control | 3.85 | MC |
| SRR6502096 | root | control | 2.57 | MC |
| SRR6502103 | root | 100 mM NaCl | 3.85 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.44 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.17 | MC |
| SRR6502106 | root | control | 3.89 | MC |
| SRR6502107 | root | control | 3.68 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.91 | MC |
| SRR1740431 | root_elongation_zone | wt | 3.15 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.78 | MC |
| SRR6441554 | seedling | wild_type | 1.10 | MC |
| SRR6441555 | seedling | wild_type | 1.38 | MC |
| SRR2154085 | seedling | wt | 3.87 | MC |
| SRR3098741 | seedling | wt | 0.49 | MC |
| SRR3098742 | seedling | wt | 2.17 | MC |
| SRR3098743 | seedling | wt | 1.09 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.47 | MC |
| SRR2857720 | seedling | drought_stress_1h | 2.29 | MC |
| SRR2857721 | seedling | drought_stress_6h | 0.80 | MC |
| SRR1944583 | seedling | no_treatment | 0.70 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.43 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.86 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.69 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.84 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.28 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.18 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 2.21 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 2.64 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.87 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.21 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 0.64 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.16 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.19 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.18 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.85 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.84 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 0.72 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 0.91 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.64 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.63 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.71 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.11 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.55 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.92 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.12 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.98 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 3.31 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 1.61 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.21 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 7.19 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.46 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.47 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.41 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.29 | MC |