| SRR4457263 | 2nd_leaf | DAH36 | 3.15 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 3.41 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 2.34 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 4.40 | MC |
| SRR358795 | callus | wt | 6.00 | MC |
| SRR358796 | callus | wt | 4.71 | MC |
| SRR358797 | callus | wt | 6.52 | MC |
| SRR358798 | callus | wt | 7.25 | MC |
| SRR6320473 | carpel | wt | 4.27 | MC |
| SRR6320498 | carpel | wt | 4.40 | MC |
| SRR5560727 | caryopsis | wild_type | 5.03 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.37 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.37 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.10 | MC |
| SRR4947495 | root | control | 4.77 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.38 | MC |
| SRR7265400 | coleoptile | 2dA | 2.58 | MC |
| SRR7265401 | coleoptile | 2dA | 2.93 | MC |
| SRR7265402 | coleoptile | 2dA | 2.41 | MC |
| SRR7265403 | coleoptile | 2dN | 4.19 | MC |
| SRR7265404 | coleoptile | 2dN | 3.91 | MC |
| SRR7265406 | coleoptile | 3dA | 2.80 | MC |
| SRR7265407 | coleoptile | 3dA | 2.31 | MC |
| SRR7265408 | coleoptile | 3dA | 1.31 | MC |
| SRR7265409 | coleoptile | 3dN | 3.94 | MC |
| SRR7265410 | coleoptile | 3dN | 3.38 | MC |
| SRR7265411 | coleoptile | 3dN | 2.97 | MC |
| SRR7265412 | coleoptile | 4dA | 2.47 | MC |
| SRR7265413 | coleoptile | 4dA | 4.43 | MC |
| SRR7265415 | coleoptile | 4dN | 3.90 | MC |
| SRR7265417 | coleoptile | 4dN | 3.50 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.65 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.71 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.88 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.86 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.24 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.38 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.88 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 3.22 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.61 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 1.16 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.56 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.81 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.22 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.78 | MC |
| SRR7265377 | embryo | 1hA | 3.48 | MC |
| SRR7265382 | embryo | 3hA | 4.44 | MC |
| SRR7265383 | embryo | 3hA | 3.99 | MC |
| SRR7265384 | embryo | 3hA | 4.10 | MC |
| SRR7265385 | embryo | 3hN | 3.69 | MC |
| SRR7265386 | embryo | 3hN | 3.02 | MC |
| SRR7265394 | embryo | 24hA | 3.99 | MC |
| SRR7265396 | embryo | 24hA | 4.64 | MC |
| SRR2338866 | endosprem | control | 1.82 | MC |
| SRR2338867 | endosprem | control | 1.03 | MC |
| SRR2338868 | endosprem | high_temperature | 1.63 | MC |
| SRR2338869 | endosprem | high_temperature | 1.25 | MC |
| SRR976168 | flag_leaf | wild_type | 1.13 | MC |
| SRR4457238 | flag_leaf | DAH20 | 3.37 | MC |
| SRR4457239 | flag_leaf | DAH20 | 4.13 | MC |
| SRR4457240 | flag_leaf | DAH28 | 2.11 | MC |
| SRR4457241 | flag_leaf | DAH28 | 2.84 | MC |
| SRR4457247 | flag_leaf | DAH44 | 4.02 | MC |
| SRR4457248 | flag_leaf | DAH44 | 4.28 | MC |
| SRR8240826 | leaf | wild_type | 1.98 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.92 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.92 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 6.54 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.12 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 3.53 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.03 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.40 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 5.01 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 3.53 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.03 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 5.40 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 5.01 | MC |
| SRR1761528 | leaf | drought | 3.53 | MC |
| SRR1761529 | leaf | drought | 3.03 | MC |
| SRR1761530 | leaf | control | 5.40 | MC |
| SRR1761531 | leaf | control | 5.01 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.66 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.72 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.86 | MC |
| SRR6417967 | leaf | H2O_control | 2.62 | MC |
| SRR6417968 | leaf | H2O_control | 2.60 | MC |
| SRR6417969 | leaf | H2O_control | 3.52 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.76 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.57 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.70 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 3.39 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 2.03 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.25 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 2.41 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 3.00 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 2.11 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.06 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 2.05 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 3.30 | MC |
| SRR8611900 | leaf | Non-inoculated | 3.70 | MC |
| SRR8611901 | leaf | Non-inoculated | 3.48 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.37 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.45 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.59 | MC |
| SRR1213693 | leaf | wt | 3.45 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 4.60 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.44 | MC |
| SRR5856930 | leaf | salt | 1.41 | MC |
| SRR5856932 | leaf | salt | 1.45 | MC |
| SRR5856937 | leaf | salt | 1.61 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.57 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.04 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.25 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 4.89 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 4.90 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.59 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.64 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.51 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 3.91 | MC |
| SRR6168973 | leaf | none (control) | 3.30 | MC |
| SRR6168974 | leaf | none (control) | 3.60 | MC |
| SRR6168975 | leaf | none (control) | 4.63 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.98 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.12 | MC |
| SRR6168979 | leaf | none (control) | 0.41 | MC |
| SRR6168980 | leaf | none (control) | 0.41 | MC |
| SRR6168981 | leaf | none (control) | 0.76 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.56 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.70 | MC |
| SRR5110432 | panicle | Dawn | 3.66 | MC |
| SRR4947496 | root | control | 2.04 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.33 | MC |
| SRR5110446 | panicle | Dusk | 4.10 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.23 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 3.94 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 4.48 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.41 | MC |
| SRR5110459 | panicle | Dawn + 21h | 3.87 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.29 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.77 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.33 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.81 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.02 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 5.11 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 5.28 | MC |
| SRR5126148 | root | "mock,1_day" | 3.78 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.06 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.97 | MC |
| SRR4947478 | root | control | 4.73 | MC |
| SRR4947479 | root | control | 3.33 | MC |
| SRR4947480 | root | control | 1.74 | MC |
| SRR4947481 | root | control | 1.62 | MC |
| SRR4947484 | root | Al | 1.74 | MC |
| SRR4947485 | root | Al | 1.71 | MC |
| SRR4947487 | root | control | 3.85 | MC |
| SRR4947488 | root | control | 1.58 | MC |
| SRR4947489 | root | control | 0.98 | MC |
| SRR4947492 | root | Al | 2.07 | MC |
| SRR4947493 | root | Al | 1.73 | MC |
| SRR4947494 | root | control | 4.39 | MC |
| SRR4947497 | root | control | 2.30 | MC |
| SRR4947500 | root | Al | 1.69 | MC |
| SRR4947501 | root | Al | 2.17 | MC |
| SRR4947504 | root | control | 2.19 | MC |
| SRR4947505 | root | control | 1.74 | MC |
| SRR4947508 | root | Al | 1.84 | MC |
| SRR4947509 | root | Al | 1.45 | MC |
| SRR6502094 | root | control | 4.28 | MC |
| SRR6502096 | root | control | 3.91 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.31 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.58 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.86 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.50 | MC |
| SRR1740433 | root_elongation_zone | wt | 0.69 | MC |
| SRR1740428 | root_meristematic_zone | wt | 0.69 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.49 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.84 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.81 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.17 | MC |
| SRR358793 | seedling | wt | 2.46 | MC |
| SRR358794 | seedling | wt | 2.08 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 1.75 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.66 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 7.31 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 9.32 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.17 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.17 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.82 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.81 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.14 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.33 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.40 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.84 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.96 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 1.80 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.58 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.35 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.83 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.48 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.84 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.36 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.91 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.07 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.80 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.75 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.44 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.35 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.76 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 3.38 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.01 | MC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 3.33 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 1.20 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 1.67 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 1.60 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 3.76 | MC |