| SRR4457249 | 2nd_leaf | DAH4 | 1.69 | MC |
| SRR4457250 | 2nd_leaf | DAH4 | 1.02 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 2.31 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 1.78 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 2.63 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 2.83 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 3.26 | MC |
| SRR4457256 | 2nd_leaf | DAH20 | 4.48 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 3.52 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 4.13 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 4.58 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 4.34 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 2.10 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 5.71 | MC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.37 | MC |
| SRR3745126 | anther | wt | 0.71 | MC |
| SRR3745127 | anther | wt | 0.89 | MC |
| SRR4947495 | root | control | 1.75 | MC |
| SRR7265401 | coleoptile | 2dA | 2.93 | MC |
| SRR7265404 | coleoptile | 2dN | 0.70 | MC |
| SRR7265405 | coleoptile | 2dN | 0.50 | MC |
| SRR7265406 | coleoptile | 3dA | 1.77 | MC |
| SRR7265408 | coleoptile | 3dA | 1.40 | MC |
| SRR7265409 | coleoptile | 3dN | 2.03 | MC |
| SRR7265410 | coleoptile | 3dN | 2.33 | MC |
| SRR7265411 | coleoptile | 3dN | 0.49 | MC |
| SRR7265417 | coleoptile | 4dN | 0.51 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 1.69 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.47 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.42 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.19 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 2.73 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.49 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.63 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.84 | MC |
| SRR7265373 | embryo | dry seed 0 h | 1.01 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.43 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.61 | MC |
| SRR7265376 | embryo | 1hA | 2.81 | MC |
| SRR7265377 | embryo | 1hA | 2.60 | MC |
| SRR7265378 | embryo | 1hA | 1.86 | MC |
| SRR7265379 | embryo | 1hN | 2.58 | MC |
| SRR7265380 | embryo | 1hN | 2.65 | MC |
| SRR7265381 | embryo | 1hN | 1.75 | MC |
| SRR7265383 | embryo | 3hA | 1.79 | MC |
| SRR7265384 | embryo | 3hA | 1.39 | MC |
| SRR7265385 | embryo | 3hN | 1.52 | MC |
| SRR7265386 | embryo | 3hN | 2.08 | MC |
| SRR7265387 | embryo | 3hN | 2.99 | MC |
| SRR7265391 | embryo | 12hN | 0.80 | MC |
| SRR7265396 | embryo | 24hA | 4.67 | MC |
| SRR7265398 | embryo | 24hN | 2.41 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.53 | MC |
| SRR4457232 | flag_leaf | DAH4 | 1.13 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.85 | MC |
| SRR4457234 | flag_leaf | DAH12 | 2.04 | MC |
| SRR4457236 | flag_leaf | DAH12 | 3.17 | MC |
| SRR4457243 | flag_leaf | DAH36 | 3.46 | MC |
| SRR4457244 | flag_leaf | DAH36 | 2.99 | MC |
| SRR4457245 | flag_leaf | DAH36 | 1.37 | MC |
| SRR1213691 | flower | wt | 1.36 | MC |
| SRR8060835 | leaf | wild_type | 2.02 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 2.84 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.27 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.13 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.16 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 4.21 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.96 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 5.33 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 4.01 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 4.49 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.43 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 4.49 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.43 | MC |
| SRR1761530 | leaf | control | 4.49 | MC |
| SRR1761531 | leaf | control | 2.43 | MC |
| SRR6417969 | leaf | H2O_control | 2.58 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.59 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.80 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 1.59 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 0.46 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.26 | MC |
| SRR8582888 | panicle | AM | 2.10 | MC |
| SRR8582890 | panicle | AM | 2.49 | MC |
| SRR5110429 | panicle | Dawn | 1.36 | MC |
| SRR5110431 | panicle | Dawn | 0.48 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 0.44 | MC |
| SRR5110438 | panicle | Dawn + 7h | 0.65 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.00 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.90 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 0.57 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.34 | MC |
| SRR5110446 | panicle | Dusk | 1.47 | MC |
| SRR5110447 | panicle | Dusk | 0.37 | MC |
| SRR5110448 | panicle | Dusk | 1.18 | MC |
| SRR5110450 | panicle | Dawn + 14h | 0.90 | MC |
| SRR5110451 | panicle | Dawn + 14h | 0.32 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.01 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 0.79 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.97 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 0.83 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.40 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.63 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.79 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.91 | MC |
| SRR1633185 | panicle | WT | 0.70 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 4.02 | MC |
| SRR5126153 | root | "mock,7_days" | 3.94 | MC |
| SRR1213694 | root | wt | 0.46 | MC |
| SRR4947478 | root | control | 0.93 | MC |
| SRR4947487 | root | control | 1.14 | MC |
| SRR4947490 | root | Al | 0.76 | MC |
| SRR4947491 | root | Al | 3.05 | MC |
| SRR4947494 | root | control | 1.63 | MC |
| SRR4947498 | root | Al | 1.59 | MC |
| SRR4947499 | root | Al | 1.33 | MC |
| SRR4947502 | root | control | 0.62 | MC |
| SRR4947503 | root | control | 0.78 | MC |
| SRR4947506 | root | Al | 1.19 | MC |
| SRR4947507 | root | Al | 0.61 | MC |
| SRR4947508 | root | Al | 1.69 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.55 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.22 | MC |
| SRR6441554 | seedling | wild_type | 1.66 | MC |
| SRR2154083 | seedling | wt | 1.80 | MC |
| SRR2154084 | seedling | wt | 1.41 | MC |
| SRR2154085 | seedling | wt | 1.36 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 2.83 | MC |
| SRR1944583 | seedling | no_treatment | 1.27 | MC |
| SRR358792 | seedling | wt | 7.51 | MC |
| SRR358794 | seedling | wt | 1.80 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.89 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.02 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.97 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.74 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.27 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.03 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.91 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.01 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.63 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.35 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.12 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.69 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.95 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.14 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 0.77 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 0.61 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.44 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 1.82 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 0.59 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.39 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 1.49 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.94 | MC |