| SRR3745127 | anther | wt | 5.05 | MC |
| SRR358795 | callus | wt | 5.81 | MC |
| SRR358796 | callus | wt | 6.43 | MC |
| SRR358797 | callus | wt | 6.86 | MC |
| SRR358798 | callus | wt | 6.64 | MC |
| SRR6320473 | carpel | wt | 6.52 | MC |
| SRR6320498 | carpel | wt | 4.69 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.32 | MC |
| SRR4947495 | root | control | 2.80 | MC |
| SRR7265400 | coleoptile | 2dA | 2.10 | MC |
| SRR7265401 | coleoptile | 2dA | 1.27 | MC |
| SRR7265402 | coleoptile | 2dA | 1.43 | MC |
| SRR7265403 | coleoptile | 2dN | 3.19 | MC |
| SRR7265404 | coleoptile | 2dN | 3.17 | MC |
| SRR7265405 | coleoptile | 2dN | 2.68 | MC |
| SRR7265406 | coleoptile | 3dA | 1.66 | MC |
| SRR7265407 | coleoptile | 3dA | 1.42 | MC |
| SRR7265408 | coleoptile | 3dA | 1.09 | MC |
| SRR7265409 | coleoptile | 3dN | 3.02 | MC |
| SRR7265410 | coleoptile | 3dN | 2.70 | MC |
| SRR7265411 | coleoptile | 3dN | 2.63 | MC |
| SRR7265412 | coleoptile | 4dA | 1.00 | MC |
| SRR7265413 | coleoptile | 4dA | 4.09 | MC |
| SRR7265414 | coleoptile | 4dA | 2.76 | MC |
| SRR7265415 | coleoptile | 4dN | 2.43 | MC |
| SRR7265416 | coleoptile | 4dN | 2.49 | MC |
| SRR7265417 | coleoptile | 4dN | 2.38 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.69 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 2.42 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.19 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 2.85 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 2.89 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.73 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.34 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 3.47 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.20 | MC |
| SRR7265375 | embryo | dry seed 0 h | 1.52 | MC |
| SRR7265376 | embryo | 1hA | 2.34 | MC |
| SRR7265377 | embryo | 1hA | 1.89 | MC |
| SRR7265378 | embryo | 1hA | 2.51 | MC |
| SRR7265379 | embryo | 1hN | 2.56 | MC |
| SRR7265380 | embryo | 1hN | 2.82 | MC |
| SRR7265381 | embryo | 1hN | 2.88 | MC |
| SRR7265383 | embryo | 3hA | 4.04 | MC |
| SRR7265385 | embryo | 3hN | 3.15 | MC |
| SRR7265386 | embryo | 3hN | 2.17 | MC |
| SRR7265387 | embryo | 3hN | 2.01 | MC |
| SRR7265388 | embryo | 12hA | 2.90 | MC |
| SRR7265389 | embryo | 12hA | 4.11 | MC |
| SRR7265390 | embryo | 12hA | 2.92 | MC |
| SRR7265391 | embryo | 12hN | 3.62 | MC |
| SRR7265392 | embryo | 12hN | 3.35 | MC |
| SRR7265393 | embryo | 12hN | 3.53 | MC |
| SRR7265394 | embryo | 24hA | 2.95 | MC |
| SRR7265395 | embryo | 24hA | 2.86 | MC |
| SRR7265396 | embryo | 24hA | 2.82 | MC |
| SRR7265397 | embryo | 24hN | 3.43 | MC |
| SRR7265398 | embryo | 24hN | 3.61 | MC |
| SRR7265399 | embryo | 24hN | 3.50 | MC |
| SRR2338866 | endosprem | control | 3.87 | MC |
| SRR8240825 | leaf | wild_type | 1.96 | MC |
| SRR8240826 | leaf | wild_type | 2.29 | MC |
| SRR8240818 | leaf | wild_type | 0.87 | MC |
| SRR8240819 | leaf | wild_type | 1.18 | MC |
| SRR8240820 | leaf | wild_type | 1.01 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.20 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.09 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.30 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 4.40 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.30 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 4.40 | MC |
| SRR1761528 | leaf | drought | 4.30 | MC |
| SRR1761529 | leaf | drought | 4.40 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.47 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.71 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.31 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 2.65 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.87 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 2.36 | MC |
| SRR5856927 | leaf | control | 0.96 | MC |
| SRR5856928 | leaf | control | 1.00 | MC |
| SRR5856929 | leaf | control | 0.99 | MC |
| SRR5856930 | leaf | salt | 0.64 | MC |
| SRR5856931 | leaf | salt | 0.82 | MC |
| SRR5856932 | leaf | salt | 0.44 | MC |
| SRR5856933 | leaf | control | 1.72 | MC |
| SRR5856934 | leaf | control | 1.17 | MC |
| SRR5856935 | leaf | control | 2.24 | MC |
| SRR5856936 | leaf | salt | 1.23 | MC |
| SRR5856937 | leaf | salt | 0.95 | MC |
| SRR5856938 | leaf | salt | 1.29 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.24 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.28 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 2.71 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.13 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 2.37 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 2.29 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 1.10 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 0.99 | MC |
| SRR6168973 | leaf | none (control) | 2.43 | MC |
| SRR6168974 | leaf | none (control) | 2.81 | MC |
| SRR6168975 | leaf | none (control) | 2.27 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 1.99 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.28 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.54 | MC |
| SRR6168980 | leaf | none (control) | 0.35 | MC |
| SRR6168981 | leaf | none (control) | 0.84 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.03 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.70 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 2.58 | MC |
| SRR4947496 | root | control | 3.24 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.92 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.20 | MC |
| SRR5110437 | panicle | Dawn + 7h | 3.87 | MC |
| SRR5110440 | panicle | Dawn + 7h | 5.16 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.61 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.30 | MC |
| SRR5110457 | panicle | Dawn + 21h | 3.57 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 1.73 | MC |
| SRR1633182 | panicle | WT | 2.31 | MC |
| SRR1633185 | panicle | WT | 2.91 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.60 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 3.23 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.92 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 4.19 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 6.66 | MC |
| SRR5126148 | root | "mock,1_day" | 3.27 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.22 | MC |
| SRR5126153 | root | "mock,7_days" | 3.67 | MC |
| SRR5126155 | root | "mock,7_days" | 3.67 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.81 | MC |
| SRR5126167 | root | "mock,14_days" | 3.39 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 3.81 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.86 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 4.49 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.88 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.20 | MC |
| SRR1213694 | root | wt | 1.60 | MC |
| SRR4947478 | root | control | 2.37 | MC |
| SRR4947479 | root | control | 2.17 | MC |
| SRR4947480 | root | control | 3.55 | MC |
| SRR4947481 | root | control | 5.32 | MC |
| SRR4947482 | root | Al | 2.02 | MC |
| SRR4947483 | root | Al | 2.32 | MC |
| SRR4947484 | root | Al | 3.89 | MC |
| SRR4947485 | root | Al | 3.52 | MC |
| SRR4947487 | root | control | 3.01 | MC |
| SRR4947488 | root | control | 2.94 | MC |
| SRR4947489 | root | control | 2.91 | MC |
| SRR4947490 | root | Al | 2.61 | MC |
| SRR4947491 | root | Al | 2.09 | MC |
| SRR4947492 | root | Al | 4.56 | MC |
| SRR4947493 | root | Al | 3.16 | MC |
| SRR4947494 | root | control | 2.35 | MC |
| SRR4947497 | root | control | 3.64 | MC |
| SRR4947498 | root | Al | 3.61 | MC |
| SRR4947499 | root | Al | 3.06 | MC |
| SRR4947500 | root | Al | 3.96 | MC |
| SRR4947501 | root | Al | 5.27 | MC |
| SRR4947502 | root | control | 2.49 | MC |
| SRR4947503 | root | control | 3.93 | MC |
| SRR4947504 | root | control | 5.08 | MC |
| SRR4947505 | root | control | 4.92 | MC |
| SRR4947506 | root | Al | 2.77 | MC |
| SRR4947507 | root | Al | 3.45 | MC |
| SRR4947508 | root | Al | 3.89 | MC |
| SRR4947509 | root | Al | 4.67 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.77 | MC |
| SRR6502094 | root | control | 3.12 | MC |
| SRR6502095 | root | control | 3.61 | MC |
| SRR6502096 | root | control | 3.13 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.83 | MC |
| SRR6502104 | root | 100 mM NaCl | 5.04 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.36 | MC |
| SRR6502106 | root | control | 2.93 | MC |
| SRR6502107 | root | control | 3.01 | MC |
| SRR6502108 | root | control | 3.93 | MC |
| SRR1740434 | root_differentiation_zone | wt | 1.34 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.55 | MC |
| SRR1740436 | root_differentiation_zone | wt | 2.30 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.14 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.03 | MC |
| SRR1740433 | root_elongation_zone | wt | 1.56 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.03 | MC |
| SRR1740429 | root_meristematic_zone | wt | 1.18 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.06 | MC |
| SRR6441555 | seedling | wild_type | 3.15 | MC |
| SRR2154083 | seedling | wt | 3.46 | MC |
| SRR2154084 | seedling | wt | 3.62 | MC |
| SRR2154085 | seedling | wt | 4.27 | MC |
| SRR2857721 | seedling | drought_stress_6h | 2.27 | MC |
| SRR358791 | seedling | wt | 7.80 | MC |
| SRR358792 | seedling | wt | 5.32 | MC |
| SRR358793 | seedling | wt | 2.44 | MC |
| SRR358794 | seedling | wt | 2.79 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.00 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.81 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.07 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.08 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.24 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.16 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.43 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 2.13 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.92 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 2.79 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 2.83 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 3.03 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 2.75 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 2.45 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.31 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.53 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 2.39 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.27 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.72 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.02 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.09 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.35 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 4.02 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 3.75 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 3.47 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 2.70 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 4.21 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.76 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.68 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 3.53 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 2.18 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 2.74 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.05 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 2.55 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 3.36 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 3.14 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 3.74 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.60 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 2.09 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 2.60 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.55 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 3.39 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.55 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 3.16 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 2.13 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 6.54 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.50 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 2.54 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 2.31 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.34 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.35 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.16 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 2.68 | MC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 2.87 | MC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 2.07 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 2.30 | MC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.19 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.14 | MC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 2.91 | MC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 3.13 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 3.74 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 3.50 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 4.17 | MC |