| SRR4457251 | 2nd_leaf | DAH4 | 0.34 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.49 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.71 | MC |
| SRR3745126 | anther | wt | 0.69 | MC |
| SRR358795 | callus | wt | 3.52 | MC |
| SRR358796 | callus | wt | 3.20 | MC |
| SRR358797 | callus | wt | 4.06 | MC |
| SRR358798 | callus | wt | 3.38 | MC |
| SRR6320473 | carpel | wt | 4.88 | MC |
| SRR6320498 | carpel | wt | 1.99 | MC |
| SRR5560727 | caryopsis | wild_type | 4.38 | MC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 4.23 | MC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 4.50 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 2.80 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.88 | MC |
| SRR7265408 | coleoptile | 3dA | 2.89 | MC |
| SRR7265412 | coleoptile | 4dA | 2.10 | MC |
| SRR7265413 | coleoptile | 4dA | 3.21 | MC |
| SRR7265414 | coleoptile | 4dA | 3.09 | MC |
| SRR7265415 | coleoptile | 4dN | 4.46 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 2.77 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.79 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.58 | MC |
| SRR2338866 | endosprem | control | 1.53 | MC |
| SRR2338867 | endosprem | control | 1.59 | MC |
| SRR2338868 | endosprem | high_temperature | 2.40 | MC |
| SRR2338869 | endosprem | high_temperature | 3.17 | MC |
| SRR976168 | flag_leaf | wild_type | 2.29 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.19 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.46 | MC |
| SRR8240826 | leaf | wild_type | 0.32 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.58 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.71 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 3.64 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 2.30 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.16 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.36 | MC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 2.16 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.66 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.68 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.50 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 5.05 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.08 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.87 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.23 | MC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 1.73 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 1.65 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 3.09 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 4.47 | MC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.58 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.75 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.60 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.41 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.24 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 4.95 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.41 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.58 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 3.61 | MC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 4.16 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.81 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 2.71 | MC |
| SRR1761790 | leaf | "wild_type,control,2" | 3.81 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 2.08 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.81 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 2.71 | MC |
| SRR1761782 | leaf | "wild_type,control,1" | 3.81 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 2.08 | MC |
| SRR1761528 | leaf | drought | 1.81 | MC |
| SRR1761529 | leaf | drought | 2.71 | MC |
| SRR1761530 | leaf | control | 3.81 | MC |
| SRR1761531 | leaf | control | 2.08 | MC |
| SRR504365 | leaf | wt | 1.70 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.41 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.17 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.99 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.71 | MC |
| SRR6502088 | leaf | control | 1.66 | MC |
| SRR6502089 | leaf | control | 1.74 | MC |
| SRR6502090 | leaf | control | 2.34 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 2.41 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 2.78 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 2.96 | MC |
| SRR6502101 | leaf | control | 3.33 | MC |
| SRR6502102 | leaf | control | 2.17 | MC |
| SRR5856937 | leaf | salt | 1.41 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 1.78 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 1.82 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 6.07 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 1.62 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.16 | MC |
| SRR6168973 | leaf | none (control) | 2.84 | MC |
| SRR6168974 | leaf | none (control) | 1.71 | MC |
| SRR6168975 | leaf | none (control) | 2.16 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.37 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.77 | MC |
| SRR6168979 | leaf | none (control) | 0.77 | MC |
| SRR6168980 | leaf | none (control) | 0.19 | MC |
| SRR6168981 | leaf | none (control) | 0.31 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.22 | MC |
| SRR8582888 | panicle | AM | 0.89 | MC |
| SRR8582889 | panicle | AM | 0.28 | MC |
| SRR8582890 | panicle | AM | 0.83 | MC |
| SRR8582891 | panicle | PM | 2.81 | MC |
| SRR8582892 | panicle | PM | 1.74 | MC |
| SRR8582893 | panicle | PM | 3.42 | MC |
| SRR5110429 | panicle | Dawn | 2.19 | MC |
| SRR5110430 | panicle | Dawn | 0.79 | MC |
| SRR5110431 | panicle | Dawn | 1.41 | MC |
| SRR5110432 | panicle | Dawn | 1.41 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.99 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.67 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.25 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.60 | MC |
| SRR5110439 | panicle | Dawn + 7h | 0.71 | MC |
| SRR5110445 | panicle | Dusk | 3.22 | MC |
| SRR5110446 | panicle | Dusk | 4.06 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.55 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.63 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.16 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.24 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.66 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.26 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.64 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.44 | MC |
| SRR5110458 | panicle | Dawn + 21h | 1.80 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.16 | MC |
| SRR5110460 | panicle | Dawn + 21h | 1.03 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.86 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.56 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 3.87 | MC |
| SRR5278377 | pistil | "Balilla,S2" | 3.89 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.52 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.25 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.90 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.32 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 3.25 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.98 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.11 | MC |
| SRR1740436 | root_differentiation_zone | wt | 3.12 | MC |
| SRR3098741 | seedling | wt | 0.99 | MC |
| SRR3098742 | seedling | wt | 0.42 | MC |
| SRR3098743 | seedling | wt | 0.97 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.61 | MC |
| SRR1944583 | seedling | no_treatment | 3.24 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.36 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 7.86 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 6.20 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.20 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.92 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.32 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.63 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.43 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.24 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 2.40 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.43 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.38 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.61 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.72 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 3.54 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.13 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.45 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.50 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.33 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 14.65 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 5.01 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.32 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 8.56 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.48 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 6.80 | MC |