| SRR4457263 | 2nd_leaf | DAH36 | 4.09 | MC |
| SRR3745125 | anther | wt | 1.36 | MC |
| SRR3745126 | anther | wt | 1.49 | MC |
| SRR3745127 | anther | wt | 1.39 | MC |
| SRR6320473 | carpel | wt | 3.55 | MC |
| SRR6320498 | carpel | wt | 4.19 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.19 | MC |
| SRR4947495 | root | control | 2.46 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.16 | MC |
| SRR7265408 | coleoptile | 3dA | 2.91 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 3.73 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.97 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.17 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.07 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.89 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.92 | MC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 2.55 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 2.25 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 3.60 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 3.14 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.51 | MC |
| SRR2338866 | endosprem | control | 4.22 | MC |
| SRR1213690 | flower | wt(flower buds) | 2.33 | MC |
| SRR1213691 | flower | wt | 3.41 | MC |
| SRR8060835 | leaf | wild_type | 1.09 | MC |
| SRR8060836 | leaf | wild_type | 1.70 | MC |
| SRR8060837 | leaf | wild_type | 1.23 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.80 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 2.92 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.68 | MC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 3.23 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.15 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.59 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 3.98 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.59 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 3.98 | MC |
| SRR1761528 | leaf | drought | 4.59 | MC |
| SRR1761529 | leaf | drought | 3.98 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.24 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 3.43 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 2.82 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 4.27 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.69 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.76 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.70 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.70 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.64 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 2.16 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 1.66 | MC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.30 | MC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.34 | MC |
| SRR1213692 | leaf | wt | 3.66 | MC |
| SRR1213693 | leaf | wt | 2.19 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 3.29 | MC |
| SRR5856929 | leaf | control | 2.05 | MC |
| SRR5856930 | leaf | salt | 0.99 | MC |
| SRR5856931 | leaf | salt | 1.38 | MC |
| SRR5856932 | leaf | salt | 1.48 | MC |
| SRR5856936 | leaf | salt | 1.66 | MC |
| SRR5856938 | leaf | salt | 1.41 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 2.93 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 5.84 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.64 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 5.54 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.46 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.53 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 6.12 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 3.94 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.43 | MC |
| SRR6168973 | leaf | none (control) | 2.56 | MC |
| SRR6168974 | leaf | none (control) | 2.17 | MC |
| SRR6168975 | leaf | none (control) | 1.93 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 3.14 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 2.12 | MC |
| SRR6168979 | leaf | none (control) | 0.43 | MC |
| SRR6168980 | leaf | none (control) | 0.39 | MC |
| SRR6168981 | leaf | none (control) | 1.06 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 1.51 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.91 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 1.03 | MC |
| SRR8582891 | panicle | PM | 5.14 | MC |
| SRR8582892 | panicle | PM | 6.80 | MC |
| SRR8582893 | panicle | PM | 4.13 | MC |
| SRR5110430 | panicle | Dawn | 3.24 | MC |
| SRR5110431 | panicle | Dawn | 3.70 | MC |
| SRR5110432 | panicle | Dawn | 3.33 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 2.53 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 1.61 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.65 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 2.78 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.46 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.81 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.04 | MC |
| SRR5110440 | panicle | Dawn + 7h | 2.53 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 1.33 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.77 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.46 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.14 | MC |
| SRR5110445 | panicle | Dusk | 1.80 | MC |
| SRR5110446 | panicle | Dusk | 1.95 | MC |
| SRR5110447 | panicle | Dusk | 1.93 | MC |
| SRR5110448 | panicle | Dusk | 3.95 | MC |
| SRR5110449 | panicle | Dawn + 14h | 2.00 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.61 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.18 | MC |
| SRR5110452 | panicle | Dawn + 14h | 2.25 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 2.71 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.21 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.80 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 3.21 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.66 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.81 | MC |
| SRR5110459 | panicle | Dawn + 21h | 2.80 | MC |
| SRR5110460 | panicle | Dawn + 21h | 4.67 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.14 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.26 | MC |
| SRR1213694 | root | wt | 2.84 | MC |
| SRR1213695 | root | wt | 2.86 | MC |
| SRR4947478 | root | control | 2.16 | MC |
| SRR4947479 | root | control | 2.37 | MC |
| SRR4947480 | root | control | 3.53 | MC |
| SRR4947481 | root | control | 5.57 | MC |
| SRR4947482 | root | Al | 2.55 | MC |
| SRR4947483 | root | Al | 2.80 | MC |
| SRR4947484 | root | Al | 3.98 | MC |
| SRR4947485 | root | Al | 4.38 | MC |
| SRR4947487 | root | control | 2.88 | MC |
| SRR4947490 | root | Al | 3.66 | MC |
| SRR4947491 | root | Al | 3.22 | MC |
| SRR4947492 | root | Al | 4.36 | MC |
| SRR4947493 | root | Al | 3.70 | MC |
| SRR4947494 | root | control | 3.16 | MC |
| SRR4947497 | root | control | 4.99 | MC |
| SRR4947498 | root | Al | 3.56 | MC |
| SRR4947499 | root | Al | 3.70 | MC |
| SRR4947500 | root | Al | 3.77 | MC |
| SRR4947502 | root | control | 3.07 | MC |
| SRR4947503 | root | control | 3.24 | MC |
| SRR4947505 | root | control | 5.47 | MC |
| SRR4947506 | root | Al | 1.99 | MC |
| SRR4947507 | root | Al | 4.33 | MC |
| SRR4947508 | root | Al | 4.70 | MC |
| SRR6502094 | root | control | 3.34 | MC |
| SRR6502095 | root | control | 3.70 | MC |
| SRR6502096 | root | control | 3.47 | MC |
| SRR6502103 | root | 100 mM NaCl | 5.04 | MC |
| SRR6502105 | root | 100 mM NaCl | 4.37 | MC |
| SRR6502106 | root | control | 2.69 | MC |
| SRR6502107 | root | control | 3.48 | MC |
| SRR6502108 | root | control | 3.21 | MC |
| SRR1740434 | root_differentiation_zone | wt | 3.09 | MC |
| SRR1740435 | root_differentiation_zone | wt | 2.38 | MC |
| SRR1740431 | root_elongation_zone | wt | 2.05 | MC |
| SRR1740432 | root_elongation_zone | wt | 2.32 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.49 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.59 | MC |
| SRR1740429 | root_meristematic_zone | wt | 3.05 | MC |
| SRR1740430 | root_meristematic_zone | wt | 2.67 | MC |
| SRR6441554 | seedling | wild_type | 1.83 | MC |
| SRR6441555 | seedling | wild_type | 2.59 | MC |
| SRR2154086 | seedling | wt | 3.71 | MC |
| SRR2154082 | seedling | wt | 2.29 | MC |
| SRR2154083 | seedling | wt | 3.50 | MC |
| SRR2154084 | seedling | wt | 3.43 | MC |
| SRR2154085 | seedling | wt | 3.40 | MC |
| SRR2154087 | seedling | wt | 3.98 | MC |
| SRR358791 | seedling | wt | 4.10 | MC |
| SRR358792 | seedling | wt | 4.74 | MC |
| SRR358793 | seedling | wt | 1.31 | MC |
| SRR358794 | seedling | wt | 1.66 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.30 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.68 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.07 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.23 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.05 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.26 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.87 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 1.28 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 1.07 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.99 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 1.74 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.78 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.24 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 3.11 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.10 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.85 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.54 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.81 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 2.82 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.27 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 2.70 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.30 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.67 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.64 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.45 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 2.76 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.07 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 7.33 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 14.01 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 6.72 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 5.74 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 7.98 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 6.15 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 6.06 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.77 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.45 | MC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.10 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 1.49 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.40 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 2.12 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.08 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.44 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.59 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.18 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 1.73 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 1.80 | MC |