| SRR358795 | callus | wt | 9.08 | MC |
| SRR358796 | callus | wt | 6.38 | MC |
| SRR358797 | callus | wt | 4.64 | MC |
| SRR358798 | callus | wt | 5.66 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.72 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 3.02 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.38 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 2.38 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.47 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 0.79 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 2.97 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 0.99 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 2.46 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 0.37 | MC |
| SRR5856927 | leaf | control | 0.48 | MC |
| SRR5856928 | leaf | control | 0.68 | MC |
| SRR5856930 | leaf | salt | 0.20 | MC |
| SRR5856931 | leaf | salt | 0.99 | MC |
| SRR5856932 | leaf | salt | 1.04 | MC |
| SRR5856933 | leaf | control | 1.92 | MC |
| SRR5856934 | leaf | control | 1.85 | MC |
| SRR5856935 | leaf | control | 1.32 | MC |
| SRR5856937 | leaf | salt | 1.19 | MC |
| SRR6168973 | leaf | none (control) | 3.09 | MC |
| SRR6168975 | leaf | none (control) | 2.33 | MC |
| SRR6168980 | leaf | none (control) | 1.22 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.63 | MC |
| SRR5126147 | root | "mock,1_day" | 0.33 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 1.69 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 1.27 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.86 | MC |
| SRR5126157 | root | "mock,7_days" | 0.75 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 3.70 | MC |
| SRR1213694 | root | wt | 1.94 | MC |
| SRR4947506 | root | Al | 0.47 | MC |
| SRR4947508 | root | Al | 2.04 | MC |
| SRR4947509 | root | Al | 1.90 | MC |
| SRR6502103 | root | 100 mM NaCl | 0.93 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.82 | MC |
| SRR6502106 | root | control | 1.53 | MC |
| SRR2154086 | seedling | wt | 3.81 | MC |
| SRR2154083 | seedling | wt | 0.28 | MC |
| SRR2154084 | seedling | wt | 3.26 | MC |
| SRR2154087 | seedling | wt | 2.14 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 1.78 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 10.04 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 9.00 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.02 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.38 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.64 | MC |