| SRR4457249 | 2nd_leaf | DAH4 | 0.73 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.34 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.68 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.49 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.45 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.45 | MC |
| SRR4457262 | 2nd_leaf | DAH36 | 0.91 | MC |
| SRR4457264 | 2nd_leaf | DAH44 | 1.04 | MC |
| SRR3745125 | anther | wt | 3.48 | MC |
| SRR3745126 | anther | wt | 3.31 | MC |
| SRR3745127 | anther | wt | 3.64 | MC |
| SRR358795 | callus | wt | 8.69 | MC |
| SRR358796 | callus | wt | 6.34 | MC |
| SRR358797 | callus | wt | 4.74 | MC |
| SRR358798 | callus | wt | 7.11 | MC |
| SRR7265400 | coleoptile | 2dA | 3.40 | MC |
| SRR7265402 | coleoptile | 2dA | 3.70 | MC |
| SRR7265406 | coleoptile | 3dA | 2.77 | MC |
| SRR7265408 | coleoptile | 3dA | 1.71 | MC |
| SRR7265412 | coleoptile | 4dA | 1.67 | MC |
| SRR7265413 | coleoptile | 4dA | 2.33 | MC |
| SRR7265414 | coleoptile | 4dA | 1.86 | MC |
| SRR7265415 | coleoptile | 4dN | 4.81 | MC |
| SRR7265416 | coleoptile | 4dN | 3.84 | MC |
| SRR7265417 | coleoptile | 4dN | 3.84 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 1.75 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 3.35 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 2.47 | MC |
| SRR7265373 | embryo | dry seed 0 h | 0.74 | MC |
| SRR7265374 | embryo | dry seed 0 h | 1.02 | MC |
| SRR7265375 | embryo | dry seed 0 h | 0.22 | MC |
| SRR7265376 | embryo | 1hA | 0.79 | MC |
| SRR7265378 | embryo | 1hA | 0.70 | MC |
| SRR7265379 | embryo | 1hN | 0.61 | MC |
| SRR7265380 | embryo | 1hN | 1.10 | MC |
| SRR7265381 | embryo | 1hN | 1.31 | MC |
| SRR7265382 | embryo | 3hA | 0.48 | MC |
| SRR7265383 | embryo | 3hA | 0.49 | MC |
| SRR7265384 | embryo | 3hA | 0.39 | MC |
| SRR7265386 | embryo | 3hN | 0.71 | MC |
| SRR7265387 | embryo | 3hN | 0.76 | MC |
| SRR7265391 | embryo | 12hN | 3.26 | MC |
| SRR7265392 | embryo | 12hN | 3.69 | MC |
| SRR7265393 | embryo | 12hN | 2.81 | MC |
| SRR7265394 | embryo | 24hA | 4.38 | MC |
| SRR7265395 | embryo | 24hA | 4.68 | MC |
| SRR7265396 | embryo | 24hA | 4.45 | MC |
| SRR7265397 | embryo | 24hN | 4.86 | MC |
| SRR7265398 | embryo | 24hN | 4.17 | MC |
| SRR2338866 | endosprem | control | 2.91 | MC |
| SRR2338868 | endosprem | high_temperature | 2.26 | MC |
| SRR2338869 | endosprem | high_temperature | 2.67 | MC |
| SRR976168 | flag_leaf | wild_type | 0.43 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.38 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.31 | MC |
| SRR4457233 | flag_leaf | DAH4 | 0.46 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.56 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.63 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.60 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.59 | MC |
| SRR4457238 | flag_leaf | DAH20 | 0.71 | MC |
| SRR4457239 | flag_leaf | DAH20 | 0.66 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.33 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.06 | MC |
| SRR8060835 | leaf | wild_type | 0.34 | MC |
| SRR8060836 | leaf | wild_type | 0.73 | MC |
| SRR8060837 | leaf | wild_type | 0.41 | MC |
| SRR8240824 | leaf | wild_type | 0.98 | MC |
| SRR8240825 | leaf | wild_type | 1.27 | MC |
| SRR8240820 | leaf | wild_type | 0.40 | MC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 3.89 | MC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 3.54 | MC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 3.16 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.31 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.38 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 0.44 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.84 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 0.44 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.84 | MC |
| SRR1761529 | leaf | drought | 0.44 | MC |
| SRR1761531 | leaf | control | 0.84 | MC |
| SRR504365 | leaf | wt | 0.23 | MC |
| SRR6417967 | leaf | H2O_control | 0.50 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 0.30 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 0.58 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 0.31 | MC |
| SRR3209773 | leaf | Watered;Short_Day | 0.41 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 0.42 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.42 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 0.45 | MC |
| SRR3209779 | leaf | Watered;Short_Day | 0.68 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 0.37 | MC |
| SRR8611900 | leaf | Non-inoculated | 1.57 | MC |
| SRR8611901 | leaf | Non-inoculated | 1.63 | MC |
| SRR8611902 | leaf | Non-inoculated | 1.90 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.47 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.54 | MC |
| SRR1213693 | leaf | wt | 0.39 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 0.96 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 1.03 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 1.04 | MC |
| SRR6502089 | leaf | control | 0.47 | MC |
| SRR6502090 | leaf | control | 0.55 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.82 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 1.20 | MC |
| SRR6502099 | leaf | 100 mM NaCl | 0.76 | MC |
| SRR6502100 | leaf | control | 0.93 | MC |
| SRR6502101 | leaf | control | 0.63 | MC |
| SRR6502102 | leaf | control | 0.83 | MC |
| SRR5856927 | leaf | control | 0.31 | MC |
| SRR5856930 | leaf | salt | 0.23 | MC |
| SRR5856933 | leaf | control | 0.51 | MC |
| SRR5856934 | leaf | control | 0.36 | MC |
| SRR5856936 | leaf | salt | 0.40 | MC |
| SRR5856937 | leaf | salt | 0.21 | MC |
| SRR5856938 | leaf | salt | 0.26 | MC |
| SRR6168973 | leaf | none (control) | 2.44 | MC |
| SRR6168974 | leaf | none (control) | 2.04 | MC |
| SRR6168975 | leaf | none (control) | 2.30 | MC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 4.08 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 0.53 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 3.05 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 0.42 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.27 | MC |
| SRR8582888 | panicle | AM | 0.84 | MC |
| SRR8582889 | panicle | AM | 0.44 | MC |
| SRR8582890 | panicle | AM | 1.03 | MC |
| SRR8582893 | panicle | PM | 0.37 | MC |
| SRR5110429 | panicle | Dawn | 0.98 | MC |
| SRR5110430 | panicle | Dawn | 1.13 | MC |
| SRR5110431 | panicle | Dawn | 1.87 | MC |
| SRR5110432 | panicle | Dawn | 1.87 | MC |
| SRR4947496 | root | control | 3.48 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 0.69 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 1.35 | MC |
| SRR5110437 | panicle | Dawn + 7h | 0.50 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.76 | MC |
| SRR5110439 | panicle | Dawn + 7h | 1.77 | MC |
| SRR5110440 | panicle | Dawn + 7h | 1.87 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.14 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.12 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 1.17 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 1.22 | MC |
| SRR5110445 | panicle | Dusk | 0.85 | MC |
| SRR5110446 | panicle | Dusk | 1.35 | MC |
| SRR5110447 | panicle | Dusk | 1.37 | MC |
| SRR5110448 | panicle | Dusk | 1.04 | MC |
| SRR5110449 | panicle | Dawn + 14h | 1.83 | MC |
| SRR5110450 | panicle | Dawn + 14h | 1.27 | MC |
| SRR5110451 | panicle | Dawn + 14h | 1.10 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.30 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.86 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 0.45 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 0.66 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.32 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.72 | MC |
| SRR5110458 | panicle | Dawn + 21h | 0.49 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.88 | MC |
| SRR5110460 | panicle | Dawn + 21h | 0.63 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 1.42 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.81 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 2.23 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 2.41 | MC |
| SRR5278376 | pistil | "Balilla,S2" | 2.87 | MC |
| SRR5126153 | root | "mock,7_days" | 3.66 | MC |
| SRR5126155 | root | "mock,7_days" | 3.15 | MC |
| SRR5126157 | root | "mock,7_days" | 2.79 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.23 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.32 | MC |
| SRR5126167 | root | "mock,14_days" | 2.46 | MC |
| SRR5126169 | root | "mock,14_days" | 3.48 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 2.79 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.09 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 5.54 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.47 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 2.17 | MC |
| SRR1213694 | root | wt | 1.06 | MC |
| SRR1213695 | root | wt | 0.29 | MC |
| SRR4947480 | root | control | 2.99 | MC |
| SRR4947481 | root | control | 3.51 | MC |
| SRR4947485 | root | Al | 1.10 | MC |
| SRR4947488 | root | control | 3.44 | MC |
| SRR4947489 | root | control | 4.59 | MC |
| SRR4947492 | root | Al | 4.08 | MC |
| SRR4947493 | root | Al | 1.80 | MC |
| SRR4947497 | root | control | 1.87 | MC |
| SRR4947500 | root | Al | 2.93 | MC |
| SRR4947501 | root | Al | 1.17 | MC |
| SRR4947504 | root | control | 3.05 | MC |
| SRR4947505 | root | control | 4.10 | MC |
| SRR4947508 | root | Al | 3.71 | MC |
| SRR4947509 | root | Al | 3.17 | MC |
| SRR6502091 | root | 100 mM NaCl | 3.13 | MC |
| SRR6502092 | root | 100 mM NaCl | 4.19 | MC |
| SRR6502093 | root | 100 mM NaCl | 2.41 | MC |
| SRR6502094 | root | control | 2.37 | MC |
| SRR6502095 | root | control | 1.62 | MC |
| SRR6502096 | root | control | 1.83 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.12 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.28 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.11 | MC |
| SRR6502106 | root | control | 1.72 | MC |
| SRR6502107 | root | control | 3.22 | MC |
| SRR6502108 | root | control | 3.45 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.43 | MC |
| SRR1740429 | root_meristematic_zone | wt | 2.05 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.74 | MC |
| SRR6441554 | seedling | wild_type | 1.63 | MC |
| SRR6441555 | seedling | wild_type | 2.04 | MC |
| SRR2154086 | seedling | wt | 2.24 | MC |
| SRR2154082 | seedling | wt | 2.24 | MC |
| SRR2154085 | seedling | wt | 1.68 | MC |
| SRR2154087 | seedling | wt | 1.48 | MC |
| SRR3098741 | seedling | wt | 0.92 | MC |
| SRR3098742 | seedling | wt | 0.77 | MC |
| SRR3098743 | seedling | wt | 1.17 | MC |
| SRR2857719 | seedling | drought_stress_0h | 2.08 | MC |
| SRR2857720 | seedling | drought_stress_1h | 1.86 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.32 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 0.45 | MC |
| SRR1944583 | seedling | no_treatment | 0.61 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.06 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.80 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 2.57 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 5.31 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 6.59 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.63 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.71 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.22 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.72 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.95 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.61 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 0.67 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.29 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.58 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 0.54 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.31 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.45 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.87 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 1.08 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.64 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 1.79 | MC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 1.02 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 1.29 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.94 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.53 | MC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 1.20 | MC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.31 | MC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 1.91 | MC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.55 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 2.24 | MC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 1.66 | MC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 1.24 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.11 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 0.99 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.97 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 0.97 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.65 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 1.09 | MC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.63 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 1.26 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 5.36 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 5.08 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 5.89 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 5.53 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 6.52 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 4.80 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 2.35 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.22 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 3.35 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 3.16 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 3.57 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 3.71 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 5.51 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 4.40 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 6.82 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 3.52 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 4.93 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 4.90 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 3.61 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 5.95 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 6.12 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 6.79 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 8.54 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 2.77 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 4.06 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 7.05 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.68 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.72 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 4.76 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 4.67 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 5.41 | MC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 3.73 | MC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 4.57 | MC |