| SRR4457250 | 2nd_leaf | DAH4 | 0.84 | MC |
| SRR4457251 | 2nd_leaf | DAH4 | 0.76 | MC |
| SRR4457252 | 2nd_leaf | DAH12 | 0.58 | MC |
| SRR4457253 | 2nd_leaf | DAH12 | 0.38 | MC |
| SRR4457254 | 2nd_leaf | DAH12 | 0.69 | MC |
| SRR4457255 | 2nd_leaf | DAH20 | 0.41 | MC |
| SRR4457257 | 2nd_leaf | DAH20 | 0.41 | MC |
| SRR4457258 | 2nd_leaf | DAH28 | 0.41 | MC |
| SRR4457259 | 2nd_leaf | DAH28 | 0.47 | MC |
| SRR4457260 | 2nd_leaf | DAH28 | 0.36 | MC |
| SRR4457261 | 2nd_leaf | DAH36 | 0.55 | MC |
| SRR4457263 | 2nd_leaf | DAH36 | 1.13 | MC |
| SRR4457265 | 2nd_leaf | DAH44 | 0.43 | MC |
| SRR5560729 | caryopsis | wild_type | 0.32 | MC |
| SRR4947495 | root | control | 3.98 | MC |
| SRR7265400 | coleoptile | 2dA | 0.39 | MC |
| SRR7265401 | coleoptile | 2dA | 0.50 | MC |
| SRR7265402 | coleoptile | 2dA | 0.53 | MC |
| SRR7265403 | coleoptile | 2dN | 0.47 | MC |
| SRR7265404 | coleoptile | 2dN | 0.54 | MC |
| SRR7265405 | coleoptile | 2dN | 0.89 | MC |
| SRR7265407 | coleoptile | 3dA | 0.30 | MC |
| SRR7265409 | coleoptile | 3dN | 0.75 | MC |
| SRR7265410 | coleoptile | 3dN | 1.11 | MC |
| SRR7265411 | coleoptile | 3dN | 1.10 | MC |
| SRR7265415 | coleoptile | 4dN | 0.61 | MC |
| SRR7265416 | coleoptile | 4dN | 0.62 | MC |
| SRR7265417 | coleoptile | 4dN | 1.02 | MC |
| SRR7265420 | coleoptile | 3dN1dA | 0.51 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 0.64 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 0.88 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 0.77 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 1.73 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.08 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.00 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.10 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 1.84 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 0.51 | MC |
| SRR7265381 | embryo | 1hN | 0.24 | MC |
| SRR7265384 | embryo | 3hA | 0.54 | MC |
| SRR7265388 | embryo | 12hA | 1.11 | MC |
| SRR7265389 | embryo | 12hA | 0.87 | MC |
| SRR7265390 | embryo | 12hA | 1.26 | MC |
| SRR7265391 | embryo | 12hN | 1.62 | MC |
| SRR7265392 | embryo | 12hN | 1.01 | MC |
| SRR7265393 | embryo | 12hN | 0.79 | MC |
| SRR7265394 | embryo | 24hA | 0.94 | MC |
| SRR7265395 | embryo | 24hA | 1.03 | MC |
| SRR7265396 | embryo | 24hA | 0.85 | MC |
| SRR7265397 | embryo | 24hN | 1.24 | MC |
| SRR7265398 | embryo | 24hN | 0.95 | MC |
| SRR7265399 | embryo | 24hN | 0.85 | MC |
| SRR2338868 | endosprem | high_temperature | 0.43 | MC |
| SRR4457231 | flag_leaf | DAH4 | 0.49 | MC |
| SRR4457232 | flag_leaf | DAH4 | 0.66 | MC |
| SRR4457233 | flag_leaf | DAH4 | 1.04 | MC |
| SRR4457234 | flag_leaf | DAH12 | 0.47 | MC |
| SRR4457235 | flag_leaf | DAH12 | 0.36 | MC |
| SRR4457236 | flag_leaf | DAH12 | 0.37 | MC |
| SRR4457237 | flag_leaf | DAH20 | 0.24 | MC |
| SRR4457241 | flag_leaf | DAH28 | 0.35 | MC |
| SRR4457243 | flag_leaf | DAH36 | 0.54 | MC |
| SRR4457244 | flag_leaf | DAH36 | 0.54 | MC |
| SRR4457245 | flag_leaf | DAH36 | 0.51 | MC |
| SRR4457246 | flag_leaf | DAH44 | 0.83 | MC |
| SRR4457247 | flag_leaf | DAH44 | 0.76 | MC |
| SRR1213690 | flower | wt(flower buds) | 1.17 | MC |
| SRR1213691 | flower | wt | 3.36 | MC |
| SRR8240825 | leaf | wild_type | 0.26 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.92 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.19 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.23 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.35 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.19 | MC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 0.39 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 0.38 | MC |
| SRR1761791 | leaf | "wild_type,control,2" | 0.60 | MC |
| SRR1761783 | leaf | "wild_type,control,1" | 0.60 | MC |
| SRR1761531 | leaf | control | 0.60 | MC |
| SRR504365 | leaf | wt | 0.45 | MC |
| SRR6417969 | leaf | H2O_control | 0.62 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 0.25 | MC |
| SRR8611900 | leaf | Non-inoculated | 0.60 | MC |
| SRR8611901 | leaf | Non-inoculated | 0.37 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.40 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.33 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.44 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.34 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 0.52 | MC |
| SRR8582888 | panicle | AM | 0.29 | MC |
| SRR8582889 | panicle | AM | 0.15 | MC |
| SRR8582890 | panicle | AM | 0.34 | MC |
| SRR5110429 | panicle | Dawn | 2.19 | MC |
| SRR5110430 | panicle | Dawn | 2.76 | MC |
| SRR5110431 | panicle | Dawn | 2.64 | MC |
| SRR5110432 | panicle | Dawn | 0.72 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 2.16 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 3.14 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 1.07 | MC |
| SRR5110437 | panicle | Dawn + 7h | 1.05 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.85 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.43 | MC |
| SRR5110440 | panicle | Dawn + 7h | 0.67 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 1.39 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 0.97 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 2.74 | MC |
| SRR5110445 | panicle | Dusk | 3.68 | MC |
| SRR5110446 | panicle | Dusk | 1.88 | MC |
| SRR5110447 | panicle | Dusk | 1.39 | MC |
| SRR5110448 | panicle | Dusk | 1.66 | MC |
| SRR5110449 | panicle | Dawn + 14h | 6.20 | MC |
| SRR5110450 | panicle | Dawn + 14h | 2.22 | MC |
| SRR5110451 | panicle | Dawn + 14h | 2.75 | MC |
| SRR5110452 | panicle | Dawn + 14h | 1.65 | MC |
| SRR5110453 | panicle | Dawn + 17.5h | 1.24 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 1.93 | MC |
| SRR5110455 | panicle | Dawn + 17.5h | 1.40 | MC |
| SRR5110456 | panicle | Dawn + 17.5h | 1.37 | MC |
| SRR5110457 | panicle | Dawn + 21h | 0.73 | MC |
| SRR5110458 | panicle | Dawn + 21h | 2.21 | MC |
| SRR5110459 | panicle | Dawn + 21h | 0.80 | MC |
| SRR5110460 | panicle | Dawn + 21h | 3.26 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.68 | MC |
| SRR1213697 | endosprem | wt(mature seeds) | 0.54 | MC |
| SRR5126147 | root | "mock,1_day" | 2.86 | MC |
| SRR5126148 | root | "mock,1_day" | 2.97 | MC |
| SRR5126149 | root | "mock,1_day" | 2.29 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 3.04 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.46 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 1.96 | MC |
| SRR5126155 | root | "mock,7_days" | 4.00 | MC |
| SRR5126157 | root | "mock,7_days" | 5.50 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 3.36 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 4.25 | MC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 2.65 | MC |
| SRR5126167 | root | "mock,14_days" | 1.87 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 1.93 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.29 | MC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 3.28 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.89 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.72 | MC |
| SRR1213694 | root | wt | 0.50 | MC |
| SRR1213695 | root | wt | 0.19 | MC |
| SRR4947478 | root | control | 1.88 | MC |
| SRR4947479 | root | control | 3.71 | MC |
| SRR4947482 | root | Al | 2.36 | MC |
| SRR4947483 | root | Al | 3.80 | MC |
| SRR4947487 | root | control | 3.09 | MC |
| SRR4947490 | root | Al | 3.59 | MC |
| SRR4947494 | root | control | 4.03 | MC |
| SRR4947502 | root | control | 5.07 | MC |
| SRR4947506 | root | Al | 2.97 | MC |
| SRR4947507 | root | Al | 5.12 | MC |
| SRR6502103 | root | 100 mM NaCl | 4.87 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.82 | MC |
| SRR6502106 | root | control | 4.15 | MC |
| SRR6502108 | root | control | 4.52 | MC |
| SRR6441554 | seedling | wild_type | 0.52 | MC |
| SRR2154086 | seedling | wt | 0.58 | MC |
| SRR2154085 | seedling | wt | 0.66 | MC |
| SRR2154087 | seedling | wt | 0.70 | MC |
| SRR3098741 | seedling | wt | 0.25 | MC |
| SRR3098743 | seedling | wt | 0.32 | MC |
| SRR2857719 | seedling | drought_stress_0h | 1.50 | MC |
| SRR358791 | seedling | wt | 0.69 | MC |
| SRR358794 | seedling | wt | 0.54 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.67 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.02 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.61 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.47 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 5.44 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 5.81 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 2.14 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.57 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.83 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 0.24 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 0.38 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 0.28 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 0.23 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 0.51 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 0.29 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 0.29 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 0.42 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 0.37 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 0.91 | MC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 1.13 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 2.15 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 1.08 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 0.60 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 0.66 | MC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 2.50 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 1.09 | MC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 1.65 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 2.81 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 1.87 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 1.70 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 2.63 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 1.94 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 2.36 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 2.08 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 5.23 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 0.91 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 1.14 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 0.57 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 1.03 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 2.28 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.03 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 1.11 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.70 | MC |