| SRR358795 | callus | wt | 2.06 | MC |
| SRR358798 | callus | wt | 1.02 | MC |
| SRR6320498 | carpel | wt | 1.07 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 0.78 | MC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 0.62 | MC |
| SRR7265376 | embryo | 1hA | 0.54 | MC |
| SRR7265377 | embryo | 1hA | 0.47 | MC |
| SRR7265378 | embryo | 1hA | 0.74 | MC |
| SRR7265383 | embryo | 3hA | 3.82 | MC |
| SRR7265385 | embryo | 3hN | 2.09 | MC |
| SRR7265386 | embryo | 3hN | 1.16 | MC |
| SRR7265387 | embryo | 3hN | 1.42 | MC |
| SRR7265391 | embryo | 12hN | 0.99 | MC |
| SRR7265392 | embryo | 12hN | 0.92 | MC |
| SRR7265393 | embryo | 12hN | 0.98 | MC |
| SRR7265397 | embryo | 24hN | 0.53 | MC |
| SRR7265398 | embryo | 24hN | 0.52 | MC |
| SRR2338866 | endosprem | control | 1.88 | MC |
| SRR2338868 | endosprem | high_temperature | 0.54 | MC |
| SRR2338869 | endosprem | high_temperature | 3.03 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.83 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.64 | MC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.80 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.50 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.47 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.73 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 0.49 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 0.78 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.55 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.40 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 0.67 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 0.59 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.27 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.40 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.92 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 0.62 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 1.25 | MC |
| SRR1761789 | leaf | "wild_type,drought,2" | 1.47 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 1.21 | MC |
| SRR1761781 | leaf | "wild_type,drought,1" | 1.47 | MC |
| SRR1761528 | leaf | drought | 1.28 | MC |
| SRR1761529 | leaf | drought | 1.47 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 0.37 | MC |
| SRR3209775 | leaf | Drought;Short_Day | 0.49 | MC |
| SRR3209776 | leaf | Drought;Short_Day | 0.45 | MC |
| SRR8611902 | leaf | Non-inoculated | 0.27 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 0.25 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 0.28 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.32 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 1.15 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 0.67 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 0.38 | MC |
| SRR6168973 | leaf | none (control) | 0.30 | MC |
| SRR6168974 | leaf | none (control) | 1.52 | MC |
| SRR6168975 | leaf | none (control) | 1.04 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 2.35 | MC |
| SRR6168980 | leaf | none (control) | 1.45 | MC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.20 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 2.36 | MC |
| SRR1213696 | endosprem | wt(milk grains) | 0.30 | MC |
| SRR5126147 | root | "mock,1_day" | 0.50 | MC |
| SRR5126148 | root | "mock,1_day" | 0.40 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 0.40 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 0.80 | MC |
| SRR5126155 | root | "mock,7_days" | 0.42 | MC |
| SRR5126165 | root | "mock,14_days" | 0.94 | MC |
| SRR5126167 | root | "mock,14_days" | 0.38 | MC |
| SRR4947480 | root | control | 0.50 | MC |
| SRR4947481 | root | control | 0.67 | MC |
| SRR4947489 | root | control | 0.46 | MC |
| SRR4947504 | root | control | 0.56 | MC |
| SRR4947505 | root | control | 0.71 | MC |
| SRR4947509 | root | Al | 1.04 | MC |
| SRR2154084 | seedling | wt | 0.28 | MC |
| SRR2154087 | seedling | wt | 0.66 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.12 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 4.87 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 0.19 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.61 | MC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.30 | MC |