| SRR358796 | callus | wt | 5.41 | MC |
| SRR358797 | callus | wt | 8.04 | MC |
| SRR358798 | callus | wt | 6.93 | MC |
| SRR6320473 | carpel | wt | 2.38 | MC |
| SRR6320498 | carpel | wt | 4.58 | MC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 3.11 | MC |
| SRR4947495 | root | control | 2.80 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 3.88 | MC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 3.30 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.17 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.49 | MC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 3.25 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 3.75 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 2.14 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.82 | MC |
| SRR2338866 | endosprem | control | 2.77 | MC |
| SRR2338867 | endosprem | control | 0.57 | MC |
| SRR2338868 | endosprem | high_temperature | 1.39 | MC |
| SRR2338869 | endosprem | high_temperature | 1.72 | MC |
| SRR976168 | flag_leaf | wild_type | 1.96 | MC |
| SRR8240824 | leaf | wild_type | 1.57 | MC |
| SRR8240825 | leaf | wild_type | 1.80 | MC |
| SRR8240826 | leaf | wild_type | 1.85 | MC |
| SRR8240818 | leaf | wild_type | 1.51 | MC |
| SRR8240819 | leaf | wild_type | 1.51 | MC |
| SRR8240820 | leaf | wild_type | 1.47 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.08 | MC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 3.51 | MC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.41 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 2.30 | MC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.58 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.91 | MC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.81 | MC |
| SRR1761788 | leaf | "wild_type,drought,2" | 4.11 | MC |
| SRR1761780 | leaf | "wild_type,drought,1" | 4.11 | MC |
| SRR1761528 | leaf | drought | 4.11 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.92 | MC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 1.58 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 2.36 | MC |
| SRR6417967 | leaf | H2O_control | 3.78 | MC |
| SRR6417968 | leaf | H2O_control | 2.71 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.99 | MC |
| SRR3209772 | leaf | Drought;Long_Day | 4.00 | MC |
| SRR3209774 | leaf | Watered;Short_Day | 2.49 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 3.10 | MC |
| SRR3209778 | leaf | Drought;Long_Day | 3.96 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.74 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 3.27 | MC |
| SRR6502085 | leaf | 100 mM NaCl | 2.93 | MC |
| SRR6502086 | leaf | 100 mM NaCl | 2.68 | MC |
| SRR6502087 | leaf | 100 mM NaCl | 2.63 | MC |
| SRR6502089 | leaf | control | 2.99 | MC |
| SRR6502090 | leaf | control | 3.04 | MC |
| SRR6502097 | leaf | 100 mM NaCl | 3.95 | MC |
| SRR6502098 | leaf | 100 mM NaCl | 3.57 | MC |
| SRR6502101 | leaf | control | 2.96 | MC |
| SRR6502102 | leaf | control | 4.18 | MC |
| SRR5856927 | leaf | control | 1.42 | MC |
| SRR5856928 | leaf | control | 2.04 | MC |
| SRR5856930 | leaf | salt | 0.80 | MC |
| SRR5856931 | leaf | salt | 1.20 | MC |
| SRR5856932 | leaf | salt | 0.56 | MC |
| SRR5856934 | leaf | control | 1.57 | MC |
| SRR5856936 | leaf | salt | 1.09 | MC |
| SRR5856937 | leaf | salt | 0.83 | MC |
| SRR5856938 | leaf | salt | 1.22 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 5.99 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 2.60 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 2.24 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 2.52 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 3.69 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 3.06 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 2.66 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.55 | MC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 1.06 | MC |
| SRR6168979 | leaf | none (control) | 0.60 | MC |
| SRR6168980 | leaf | none (control) | 1.46 | MC |
| SRR8582888 | panicle | AM | 2.93 | MC |
| SRR4947496 | root | control | 3.77 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 4.56 | MC |
| SRR5126148 | root | "mock,1_day" | 2.94 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 3.83 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 1.62 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 0.92 | MC |
| SRR4947478 | root | control | 3.93 | MC |
| SRR4947479 | root | control | 1.90 | MC |
| SRR4947480 | root | control | 4.60 | MC |
| SRR4947481 | root | control | 4.21 | MC |
| SRR4947482 | root | Al | 3.48 | MC |
| SRR4947483 | root | Al | 2.67 | MC |
| SRR4947484 | root | Al | 2.03 | MC |
| SRR4947487 | root | control | 3.78 | MC |
| SRR4947488 | root | control | 1.69 | MC |
| SRR4947489 | root | control | 4.14 | MC |
| SRR4947490 | root | Al | 4.20 | MC |
| SRR4947492 | root | Al | 4.62 | MC |
| SRR4947493 | root | Al | 4.47 | MC |
| SRR4947494 | root | control | 2.58 | MC |
| SRR4947497 | root | control | 5.28 | MC |
| SRR4947498 | root | Al | 4.84 | MC |
| SRR4947499 | root | Al | 2.30 | MC |
| SRR4947500 | root | Al | 5.52 | MC |
| SRR4947502 | root | control | 4.76 | MC |
| SRR4947503 | root | control | 3.54 | MC |
| SRR4947504 | root | control | 3.16 | MC |
| SRR4947505 | root | control | 3.10 | MC |
| SRR4947506 | root | Al | 4.04 | MC |
| SRR4947508 | root | Al | 4.35 | MC |
| SRR4947509 | root | Al | 3.01 | MC |
| SRR6502091 | root | 100 mM NaCl | 4.52 | MC |
| SRR6502092 | root | 100 mM NaCl | 3.83 | MC |
| SRR6502093 | root | 100 mM NaCl | 3.32 | MC |
| SRR6502094 | root | control | 4.11 | MC |
| SRR6502095 | root | control | 2.38 | MC |
| SRR6502096 | root | control | 2.76 | MC |
| SRR6502104 | root | 100 mM NaCl | 3.61 | MC |
| SRR6502105 | root | 100 mM NaCl | 3.68 | MC |
| SRR6502106 | root | control | 3.78 | MC |
| SRR6502108 | root | control | 4.17 | MC |
| SRR1740435 | root_differentiation_zone | wt | 1.79 | MC |
| SRR1740436 | root_differentiation_zone | wt | 3.05 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.23 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.64 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.00 | MC |
| SRR1740428 | root_meristematic_zone | wt | 2.99 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.97 | MC |
| SRR1740430 | root_meristematic_zone | wt | 1.44 | MC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 1.90 | MC |
| SRR358793 | seedling | wt | 5.65 | MC |
| SRR358794 | seedling | wt | 5.06 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.01 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.83 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 4.69 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.64 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.99 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.29 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.11 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 4.81 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 2.37 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 2.61 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.33 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.90 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 4.58 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 4.21 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.67 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 3.57 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.58 | MC |